Alias |
OBP4, AtDof5. 4 |
TF Classification |
|
TAIR short description |
OBF binding protein 4 (.1) |
TAIR annotation |
Encodes a zinc finger protein. (.1) |
Gene model |
|
Entry clone (w/o stop) |
RE_0490 |
External link |
|
Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 44212: nucleic acid binding |
->transcription regulatory region DNA binding |
(F) 46872: other binding |
->metal ion binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: transcription,DNA-dependent |
->regulation of transcription, DNA-templated |
|
miRNA/tasiRNA |
Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
miRN139: 3'-TGAAGATGTTCTTGACAGCAT-5' |
|
 |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
1 |
|
|
1 |
soybean |
|
1 |
|
|
1 |
rice |
|
1 |
|
|
1 |
sorghum |
|
|
|
|
|
physcomitrella |
|
|
|
|
|
Total |
|
3 |
|
|
3 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
|
adventitious shoot formation (direct input),
too many rosettes (direct input),
short stamen (direct input),
abnormal stem (direct input),
slow growth (direct input),
narrow leaf (direct input),
abnormal carpel (direct input),
abnormal petal (direct input),
non-rosette growth (direct input),
abnormal flower (direct input),
pollen defective (direct input),
abnormal seedling (direct input),
long petiole (direct input),
late flowering (direct input)
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
slow growth,
short petiole
(A20584-52)
late flowering,
too many rosettes
(A20586-174)
late flowering,
long petiole
(A20265-150)
late flowering,
long petiole
(A20265-149)
abnormal leaf
(A20266-175)
non-rosette growth,
abnormal leaf
(A20215-252)
narrow leaf
(A20211-203)
long petiole
(A20265-151)
too many rosettes
(A20263-32)
late flowering,
long petiole
(A20265-146)
late flowering,
long petiole
(A20265-145)
|
Phenotype in ornamental plants
|
|
Comment |
|