fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G61850 LFY3, LFY LEAFY 3, floral meristem identity control protein LEAFY (LFY) (.1)

>AT5G61850.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 3
HindIII A|AGCTT 962
PstI CTGCA|G 88
SalI G|TCGAC 1215
StyI C|C[AT][AT]GG 848
XbaI T|CTAGA 379


Click here to view TAIR data

>AT5G61850.1 length:1263
ATGGATCCTG AAGGTTTCAC GAGTGGCTTA TTCCGGTGGA ACCCAACGAG 
50
AGCATTGGTT CAAGCACCAC CTCCGGTTCC ACCTCCGCTG CAGCAACAGC 
100
CGGTGACACC GCAGACGGCT GCTTTTGGGA TGCGACTTGG TGGTTTAGAG 
150
GGACTATTCG GTCCGTACGG TATACGTTTC TACACGGCGG CGAAGATAGC 
200
GGAGTTAGGT TTTACGGCGA GCACGCTTGT GGGTATGAAG GACGAGGAGC 
250
TTGAAGAGAT GATGAATAGT CTCTCTCATA TCTTTCGTTG GGAGCTTCTT 
300
GTTGGTGAAC GGTACGGTAT CAAAGCTGCC GTTAGAGCTG AACGGAGACG 
350
ATTGCAAGAA GAGGAGGAAG AGGAATCTTC TAGACGCCGT CATTTGCTAC 
400
TCTCCGCCGC TGGTGATTCC GGTACTCATC ACGCTCTTGA TGCTCTCTCC 
450
CAAGAAGGGT TATCTGAGGA ACCGGTGCAG CAACAAGACC AGACTGATGC 
500
GGCGGGGAAT AACGGCGGAG GAGGAAGTGG TTACTGGGAC GCAGGTCAAG 
550
GAAAGATGAA GAAGCAACAG CAGCAGAGAC GGAGAAAGAA ACCAATGCTG 
600
ACGTCAGTGG AAACCGACGA AGACGTCAAC GAAGGTGAGG ATGACGACGG 
650
GATGGATAAC GGCAACGGAG GTAGTGGTTT GGGGACAGAG AGACAGAGGG 
700
AGCATCCGTT TATCGTAACG GAGCCTGGGG AAGTGGCACG TGGCAAAAAG 
750
AACGGCTTAG ATTATCTGTT CCACTTGTAC GAACAATGCC GTGAGTTCCT 
800
TCTTCAGGTC CAGACAATTG CTAAAGACCG TGGCGAAAAA TGCCCCACCA 
850
AGGTGACGAA CCAAGTATTC AGGTACGCGA AGAAATCAGG AGCGAGTTAC 
900
ATAAACAAGC CTAAAATGCG ACACTACGTT CACTGTTACG CTCTCCACTG 
950
CCTAGACGAA GAAGCTTCAA ATGCTCTCAG AAGAGCGTTT AAAGAACGCG 
1000
GTGAGAACGT TGGCTCATGG CGTCAGGCTT GTTACAAGCC ACTTGTGAAC 
1050
ATCGCTTGTC GTCATGGCTG GGATATAGAC GCCGTCTTTA ACGCTCATCC 
1100
TCGTCTCTCT ATTTGGTATG TTCCAACAAA GCTGCGTCAG CTTTGCCATT 
1150
TGGAGCGGAA CAATGCGGTT GCTGCGGCTG CGGCTTTAGT TGGCGGTATT 
1200
AGCTGTACCG GATCGTCGAC GTCTGGACGT GGTGGATGCG GCGGCGACGA 
1250
CTTGCGTTTC TAG
1300

>AT5G61850.1 longest ORF length:420
MDPEGFTSGL FRWNPTRALV QAPPPVPPPL QQQPVTPQTA AFGMRLGGLE 
50
GLFGPYGIRF YTAAKIAELG FTASTLVGMK DEELEEMMNS LSHIFRWELL 
100
VGERYGIKAA VRAERRRLQE EEEEESSRRR HLLLSAAGDS GTHHALDALS 
150
QEGLSEEPVQ QQDQTDAAGN NGGGGSGYWD AGQGKMKKQQ QQRRRKKPML 
200
TSVETDEDVN EGEDDDGMDN GNGGSGLGTE RQREHPFIVT EPGEVARGKK 
250
NGLDYLFHLY EQCREFLLQV QTIAKDRGEK CPTKVTNQVF RYAKKSGASY 
300
INKPKMRHYV HCYALHCLDE EASNALRRAF KERGENVGSW RQACYKPLVN 
350
IACRHGWDID AVFNAHPRLS IWYVPTKLRQ LCHLERNNAV AAAAALVGGI 
400
SCTGSSTSGR GGCGGDDLRF 
450