fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G61850 (LFY3, LFY)

Alias LFY3, LFY
TF Classification
FioreDBLFY (Click to show phylogenetic tree)
RARTFLFY
AtTFDBOrphan
PlnTFDBLFY (v3.0), LFY (v1.0)
DATFLFY
TAIR short description LEAFY 3, floral meristem identity control protein LEAFY (LFY) (.1)
TAIR annotation Encodes transcriptional regulator that promotes the transition to flowering.Involved in floral meristem development. LFY is involved in the regulation of AP3 expression, and appears to bring the F-box protein UFO to the AP3 promoter. (.1)
Gene model
Gene model cDNA support
AT5G61850.1 4
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10077: other biological processes ->maintenance of inflorescence meristem identity
(P) 10582: developmental processes ->floral meristem determinacy
(P) 30154: other cellular processes ->cell differentiation
(F) 31490: DNA or RNA binding ->chromatin DNA binding
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 42803: protein binding ->protein homodimerization activity
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 43621: protein binding ->protein self-association
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9740: signal transduction ->gibberellic acid mediated signaling pathway
(P) 9908: developmental processes ->flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1 2
rice 1 1
sorghum 1 1
physcomitrella 1 1 2
Total 5 2 7
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        Transformation of floral meristem into secondary inflorescence shoot or abnormal flower

         abnormal flower (direct input)


        		
       

       

        CRES-T phenotype from publication
        
abnormal flower (PMID17147638)
        
       


       

        CRES-T phenotype from bulk project
        
         bushy, 
         abnormal flower 
         (A20412-157)
         

         
         
         


        		
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID20
           Gentiana
           AtACT2pro:AtCDS-SRDX
           2005-06-20
            
           no phenotye 
            
          

          

           ID21
           Chrysanthemum
           35S:AtCDS-SRDX
           2005-08-18
            
           no phenotype 
            
          

          

           ID50014
           Torenia
           35S:AtCDS-SRDX
           2005-08-18
            
           reduced wings, square corolla 
           
          

          

           ID50023
           Chrysanthemum
           35S:CmOrtholog-SRDX
           2007-07-05
            
           late flowering  
           and more...
          

          

           ID19
           Cyclamen
           35S:AtCDS-SRDX
           2005-06-20
            
           no phenotype 
            
          

         

         

          Comment