Locus |
Common name |
Short description |
AT5G65410 |
ATHB25, ZFHD2, ZHD1 |
ZINC FINGER HOMEODOMAIN 1, ZINC FINGER HOMEODOMAIN 2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25, homeobox protein 25 (.1) |
>AT5G65410.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
647 |
KpnI
| GGTAC|C |
310 |
PvuII
| CAG|CTG |
296, 548 |
Click here to view TAIR data
>AT5G65410.1 length:840
ATGGAGTTTG AAGACAACAA CAACAACAAC GACGAAGAGC AAGAAGAGGA | 50 |
TATGAATCTT CATGAGGAAG AAGAAGACGA CGACGCCGTT TACGACTCTC | 100 |
CTCCTCTCTC TCGTGTTCTC CCCAAAGCCT CGACAGAAAG TCATGAAACC | 150 |
ACCGGAACTA CTTCCACAGG CGGTGGCGGA GGATTCATGG TTGTTCACGG | 200 |
CGGTGGAGGG AGCAGGTTTA GGTTCCGTGA GTGTCTCAAG AACCAAGCGG | 250 |
TGAACATAGG AGGACACGCG GTCGATGGTT GTGGTGAGTT TATGCCAGCT | 300 |
GGAATCGAAG GTACCATCGA CGCTCTAAAA TGCGCCGCTT GTGGCTGTCA | 350 |
CCGTAACTTC CACCGCAAGG AATTACCTTA CTTCCATCAC GCGCCGCCAC | 400 |
AACATCAGCC TCCTCCTCCC CCGCCAGGGT TTTACCGTCT TCCAGCTCCG | 450 |
GTTAGCTACC GACCACCACC GTCACAAGCT CCTCCTCTTC AGCTCGCTCT | 500 |
TCCCCCTCCA CAAAGAGAGA GATCAGAAGA TCCAATGGAG ACGTCTTCAG | 550 |
CTGAAGCAGG AGGAGGGATT AGGAAGAGGC ATAGGACTAA GTTTACGGCT | 600 |
GAGCAAAAGG AAAGGATGTT AGCTTTAGCT GAGAGGATTG GATGGAGAAT | 650 |
TCAGAGACAA GACGATGAAG TGATTCAGAG ATTTTGTCAG GAGACTGGTG | 700 |
TTCCGAGACA AGTTCTTAAG GTTTGGTTAC ATAACAACAA ACACACTCTT | 750 |
GGTAAGTCGC CTTCACCACT TCATCATCAT CAGGCTCCTC CTCCTCCACC | 800 |
ACCACAGTCT TCGTTTCATC ATGAACAAGA CCAACCATGA | 850 |
>AT5G65410.1 longest ORF length:279
MEFEDNNNNN DEEQEEDMNL HEEEEDDDAV YDSPPLSRVL PKASTESHET | 50 |
TGTTSTGGGG GFMVVHGGGG SRFRFRECLK NQAVNIGGHA VDGCGEFMPA | 100 |
GIEGTIDALK CAACGCHRNF HRKELPYFHH APPQHQPPPP PPGFYRLPAP | 150 |
VSYRPPPSQA PPLQLALPPP QRERSEDPME TSSAEAGGGI RKRHRTKFTA | 200 |
EQKERMLALA ERIGWRIQRQ DDEVIQRFCQ ETGVPRQVLK VWLHNNKHTL | 250 |
GKSPSPLHHH QAPPPPPPQS SFHHEQDQP | 300 |
|