fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT5G65410 ATHB25, ZFHD2, ZHD1 ZINC FINGER HOMEODOMAIN 1, ZINC FINGER HOMEODOMAIN 2, ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25, homeobox protein 25 (.1)

>AT5G65410.1 genomic map

>>Show CDS map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, NcoI, NotI, SacI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 825, 2278, 2890, 5429, 5641, 5908
EcoRI G|AATTC 2606, 4731, 6352
HindIII A|AGCTT 479, 956, 1663, 3322, 3359, 5315, 5850
HpaI GTT|AAC 563
KpnI GGTAC|C 4394
NdeI CA|TATG 1550, 3205, 5279, 5970, 6290
NheI G|CTAGC 5422, 5756
PacI TTAAT|TAA 4965
PstI CTGCA|G 549, 641, 871
PvuII CAG|CTG 2172, 2465, 4380, 4632
SalI G|TCGAC 1598
SpeI A|CTAGT 2786
StyI C|C[AT][AT]GG 5630


Click here to view TAIR data

>AT5G65410 genomic sequence (4085-4924,) length:6589
TGCAGCTATT CCTGGAATGC AAGAACAGgt acataactgc ataactgatc 
50
ataatcctgg ttctgagatt gaatctgctt atgatatttt gaagaatgaa 
100
acctattgtt agagtagttt tctattgttc tgttttgagc aagtgtgtga 
150
tgttgaaacc atttatatgc aacagagagg ttgaatctga attgaagaat 
200
gaaacatgtt gttttaatag tttgagtaag tctgtgatgt tgtaaactgt 
250
tttgtagGGA TCGGCTCTAA CTAAGGTGCC AAAAGTCAAG TTTTTAGTTA 
300
TCATTTCTGG AGCGAAAATT CCAGGGTTGA TGTTTGGGGA GCCTAAAGCT 
350
GCTGTTAATG CATTCTCATC TCCAGTTCGT TGCCCATCAC TCCACTTCAT 
400
AGgtaaactg ttactacgtt gcgcatgttc ttgacttgat ttctcggtta 
450
tgttgtaatg ccaagtttct gttgtttgaa gcttacgtta gtagtgtgcc 
500
tttagtgtag ccaagattgg catgggagtg tttagactag aatctaatct 
550
gcagcactac atgttaacgt tagagattct ctcctacaac atttgatatg 
600
acataagaga caacttgttt gtaattctgt atcggttttg ctgcagGTGA 
650
GAGGGATTTC CTGAAGATAG AAGGTGAAGT GCTTGTAGAA TCATTCGTAG 
700
AGCCAGTGGT GATCCATCAT TCAGGTGGAC ACATTATACC AAAACTCGgt 
750
tagtaagcat gaaaggctga tcatttaagc tctgattttt tttggagaaa 
800
tatgcaattg aaataagtaa cataagatct gtctcttctt aatttactct 
850
aatgagctta tctttgtctt ctgcagATAC TAAAGCTGAG GAGACAATGT 
900
TGAGTTTCTT CCAGAGCATT AGGCAGATGC TTTCTGATGA ATCAGGTTCT 
950
GTAAGAAGCT TGATGTGAct gagagctact ccagtatggt ttactttaga 
1000
ttagatgatc ttgcaatttt ataaaattgt gagatgtgat tattcttctg 
1050
gtttagtctt tatccaggga caattcaata aacgtaaatt attaaattta 
1100
ccaaccaata tggattgccc gttcatgtaa ttacagttta tagagaagag 
1150
ccaaagatgg tcaaatagtt tggtacaatt gtcttccttt aaatatatga 
1200
gcagccaata tcaaaaactc tattcaaact tttttctttg ttataggaaa 
1250
aatgttagga gaatttaaca acaaaaaaaa aaaatgatgg aagaacaaaa 
1300
aatatggagg ggggcatcaa agaaggtgag ttaaattatt gtcctttaga 
1350
tgtattaatg gtcaaatgga tctcatgata atctatgagt tccacttgta 
1400
acaaagtttt acttcttttt caatctaccc ccttataccc tattaactta 
1450
gccttgtcgg ttgctttcta gtcttaaaaa aaaaacaaaa tttcaactct 
1500
ttttttattc ttgtatgaaa taattgattg aacatatcga attacagatc 
1550
atatgattac ccctcatttc aaaataaata tatgataaac agtagacgtc 
1600
gacatgggtt gtgtaatttc agacttatat gtatacccat cataagtatt 
1650
ctcacgcttg caaagcttta actgtttagt tttcatgcac ttttaacaaa 
1700
tcatcatcat aatctatttt caacaatttg cttatatctt gaaatagttg 
1750
tttggtttag tttttgtgtt gttttccctg ttctcatgat ataccaaacc 
1800
actattttaa taagaggtag aaaataattt ctcgtgagaa tgtctagttg 
1850
tgaattgtga tgaccgtatc aacattaatg tatagatata tgcaataaat 
1900
tgaatttcaa agaccctatc attgacttag gaaatctatt aactcatgaa 
1950
ttatgtctgg cataaaactg ttgaatagtt tttacatgtt tcttttgata 
2000
atactacttc tgtctcttta agtttttgtg taacctattt atgatttcta 
2050
attttgagat taagaaattt tgaaattcgg tttagtaaga aatgtaacgt 
2100
tatgatgatt tacgaataat gaacggagac aaatcctctg tgtgtctcca 
2150
cgtaggaaag cggtttcccg ccagctgaca agtaacacgt aagcacgtca 
2200
tctcaaacgt ctttcaggaa tccatttgct tcatttcctc ctcttattaa 
2250
tatttagtcg gtgttttata tattttcaga tctttatttt tcttgtaaca 
2300
taaaaattac acttttttgt tcatgtcaaa tgagttttca ttattcactc 
2350
ttaaatctta atctctgctt tgaaatttga gccgtacaaa aacattcgca 
2400
tttattgttg atgcgacaca gatgttactt ttattttatt atactattat 
2450
tctgaaggaa cggtcagctg tatttttata gtataatttt aatttaaatc 
2500
atcataatct ggttattgaa aaattatttc attttcaact ttttattgtt 
2550
ttataagatt ggaaatattt gaatattgat gagagcgaat gttggtttcc 
2600
ttctcgaatt ctcgtatacc aatgctaata tttctttaaa gaaaatactc 
2650
catagtatgt tttttcttta aatttaatta gctacgtcaa caaatttttt 
2700
atatttctca caaataactt acgtaaattc atcatgcaat tttgtgttga 
2750
caagaccaat gaccctcgac tgaattaatg aagagactag tcgttaaaaa 
2800
aataatactc agttatatga gtatataata gtgctggtcg tttaaagaaa 
2850
acagtaaaag catagtgaaa ggataaaaac tgtcgtcgga gatctaacgt 
2900
cagcataagt taatcagagg ctgagaaatg atcatctcat acgtttcgtc 
2950
ttcacatttg caactaatct acaagtattt aatgtatcat taaacttttg 
3000
tttacttgat gacacaaaat aaaactaaat aaagttttat tttagtgttt 
3050
atatatttat actgaattat ttagtaataa ttctgaaaag ttgacaacaa 
3100
aattcagacc ttgaaattat taagggcatt actgattttg atgtgattag 
3150
actgcccatc actttattgc agaaaaatat taatgcatat atttatgcta 
3200
ttggcatatg gacaaaaata attatcgcgt ttattttgat tctatcccct 
3250
ttttttttag tttcccaaaa agttatctct aatatcatct cctctctctt 
3300
tttgtttttt aatcctacac taagcttttt gtattgttgt attgtccaaa 
3350
aataacaaaa gcttatggaa aacttgtaaa acccataagc tacctagtgt 
3400
gttttaagat gagccctaga actactcctg aagaagacaa acatgtttaa 
3450
ttatatcatt ttaattcaag attacataaa taagttttta gtgtgtcatt 
3500
tttagaagaa aattagtaat atttcgttca attttcacat gtaggtaaca 
3550
atctttacaa ctttaagtaa taacccagga aaaaataaac agtaaatgga 
3600
atcaagtaaa cacgaactca aatcaatttc tttttaacgt gtctttttat 
3650
atcataaaca tggttaaaat ttgtgatcta atacaagaat agttgactaa 
3700
aacaaatcat gcatggtcag agcgatacga ccaaattgaa taaaataata 
3750
ggaatatata attaataaga aagtataata gctcttcaag taaaattaga 
3800
aagaaagaaa gaaataatgc aaaagataaa gaaagcgtta caaagtgtgg 
3850
ttgaggacag attatattag attccgattt ccaataaaca agaaattata 
3900
tagcaaaaat aaaagataaa aataaaataa aaacacttct caaatcggca 
3950
aatccaaaag agagagataa aagagagaaa gataatctct ttaatgtcca 
4000
cattatctct ctcttcttct tcaccttctt gagaaacctc ctctccccaa 
4050
aaacgacgta gtttcacatt tctcgacttc ttgaATGGAG TTTGAAGACA 
4100
ACAACAACAA CAACGACGAA GAGCAAGAAG AGGATATGAA TCTTCATGAG 
4150
GAAGAAGAAG ACGACGACGC CGTTTACGAC TCTCCTCCTC TCTCTCGTGT 
4200
TCTCCCCAAA GCCTCGACAG AAAGTCATGA AACCACCGGA ACTACTTCCA 
4250
CAGGCGGTGG CGGAGGATTC ATGGTTGTTC ACGGCGGTGG AGGGAGCAGG 
4300
TTTAGGTTCC GTGAGTGTCT CAAGAACCAA GCGGTGAACA TAGGAGGACA 
4350
CGCGGTCGAT GGTTGTGGTG AGTTTATGCC AGCTGGAATC GAAGGTACCA 
4400
TCGACGCTCT AAAATGCGCC GCTTGTGGCT GTCACCGTAA CTTCCACCGC 
4450
AAGGAATTAC CTTACTTCCA TCACGCGCCG CCACAACATC AGCCTCCTCC 
4500
TCCCCCGCCA GGGTTTTACC GTCTTCCAGC TCCGGTTAGC TACCGACCAC 
4550
CACCGTCACA AGCTCCTCCT CTTCAGCTCG CTCTTCCCCC TCCACAAAGA 
4600
GAGAGATCAG AAGATCCAAT GGAGACGTCT TCAGCTGAAG CAGGAGGAGG 
4650
GATTAGGAAG AGGCATAGGA CTAAGTTTAC GGCTGAGCAA AAGGAAAGGA 
4700
TGTTAGCTTT AGCTGAGAGG ATTGGATGGA GAATTCAGAG ACAAGACGAT 
4750
GAAGTGATTC AGAGATTTTG TCAGGAGACT GGTGTTCCGA GACAAGTTCT 
4800
TAAGGTTTGG TTACATAACA ACAAACACAC TCTTGGTAAG TCGCCTTCAC 
4850
CACTTCATCA TCATCAGGCT CCTCCTCCTC CACCACCACA GTCTTCGTTT 
4900
CATCATGAAC AAGACCAACC ATGAatcttg aatttctttg atcactaggg 
4950
ttttaattta gcttaattaa ttacttgaga aatttgagag acaaggtttt 
5000
tattgtttaa tttatgtacc cattttcctc tttgatgatg atgttgatga 
5050
tgttggtgat gatctttaat ttctggttaa ttatgttttg cattagtagc 
5100
tttttaagtc tcttagcaaa atctttgatt ggtctgacta taaattactg 
5150
acgtccttat ttgcatcaca tttgtcagtg tttgaattta tcatgttttg 
5200
tgtatgaatc tatatgaact tgatcctgaa tatatatgta catgtatttt 
5250
gtgtatgcat tatttatgtc ttctttagca tatgatttca tttttatttt 
5300
attttgtgca gcctaagctt ttacttgttg acattgttat atattgtttc 
5350
ttaagttcct ggtgtttttg tgtgttatta tatttgactg accattattt 
5400
tcacccacac acacatttgt agctagctag atctgatagt gttcttgttt 
5450
cttaagttct aggtttttga gtgtttatat attttcttga tcatttttta 
5500
ccacacatat ctaatgataa attggttatt gtcataatta tatcttatgt 
5550
gggattctat atatatatat atacttgtca tttaattgtc caatgagtgt 
5600
aggactcaaa tgtggatcgg tcggaatttc cttgggatgg agatctctgc 
5650
cctaagaatt aaataagtat ttcaatggct tatattatta tcatatatgc 
5700
gtgaattaaa taattttttt tttccattgg aaatgaaaaa ggtgaaataa 
5750
catcagctag ctgcggcaac agtattctga ttcctgggaa ttaattcttc 
5800
acttaaaaaa aaaaaaaaaa attaaactca aaacatgtcg atgcatccaa 
5850
agcttcttat atcctcttta tgtcttatat tatatgtata tgtatattgt 
5900
tctttgaaga tctggggaag aaggaaacat gtgggcttct ttggaagcaa 
5950
gaaggagaag ataggaaaac atatgggcac acatacatta ctgcattaat 
6000
gatgttcttc ttccaaatcc ctagactttc atctggaact aattttgttt 
6050
actttttctt aagatcactc attcacttat ttcacctcta atgataattt 
6100
aatttgagta gtaaacattc aatttaatcg agcaaaaaca tattcaattg 
6150
gttccataat catttagtag taataacaat atcaatttca acgagttaca 
6200
gtaattataa ttaacaaaag tggttcggcc tagtaattta ttttatgcaa 
6250
agtgtgtttg tgaaaaattt attgactaag gtatgtgtac atatgaacat 
6300
acattatatc tctctatctt acatcgtata cctgagagaa acaaagataa 
6350
tgaattcaga tgaaattagg gttttgagtg atggtgaaat gcaaagatgc 
6400
agaggaaaga gggaaccaaa atgattgtaa aaggaaagaa gaggcagata 
6450
agattcgagt ccccatctca cggccatttc catatatagc ttttcatgtc 
6500
tcaacctctc catcatctct ctctttttct ctctccctca gacagtgcag 
6550
taaaactcga aagagagtga gagagagaca aatatacac
6600