fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G01380 (ETC1)

Alias ETC1
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / WEREWOLF
AtTFDB
PlnTFDBMYB-related (v3.0), MYB-related (v1.0)
DATFMYB-related
TAIR short description ENHANCER OF TRY AND CPC 1, Homeodomain-like superfamily protein (.1)
TAIR annotation ETC1 is involved in trichome and root hair patterning in Arabidopsis. (.1)
Gene model
Gene model cDNA support
AT1G01380.1 5
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(P) 1900033: other cellular processes ->negative regulation of trichome patterning
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: DNA or RNA binding ->transcription regulatory region DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 6357: other cellular processes ->regulation of transcription from RNA polymerase II promoter
(P) 80147: other cellular processes ->root hair cell development
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

         glabra (direct input)
        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         glabra 
         (A20779-186)
         

         glabra, 
         hyponastic leaf 
         (A20750-11)
         

         glabra 
         (A20779-160)
         

         glabra 
         (A20752-136)
         

         glabra 
         (A21033-43)
         

         glabra, 
         light seed color 
         (A20779-199)
         

         glabra 
         (A20750-42)
         

         narrow leaf 
         (A20752-127)
         

         glabra 
         (A20752-120)
         

         glabra 
         (A20752-129)
         

         glabra, 
         light seed color 
         (A20325-7)
         

         
         

         glabra 
         (A20779-182)
         

         glabra 
         (A20750-19)
         

         glabra 
         (A20325-9)
         

         
         

         glabra 
         (A20750-15)
         

         glabra 
         (A20751-57)
         

         glabra 
         (A20751-98)
         

         glabra 
         (A20325-8)
         

         
         

         glabra 
         (A20750-16)
         

         glabra 
         (A20751-60)
         

         glabra 
         (A20752-140)
         

         glabra 
         (A20750-21)
         

         glabra 
         (A20752-116)
         

         glabra 
         (A20779-187)
         

         glabra 
         (A20325-21)
         

         
         

         glabra 
         (A20779-158)
         

         hyponastic leaf 
         (A20779-170)
         

         glabra 
         (A20326-77)
         

         
         

         glabra 
         (A20325-34)
         

         
         

         glabra 
         (A20750-43)
         

         glabra 
         (A20751-67)
         

         hyponastic leaf 
         (A20779-156)
         

         glabra 
         (A20752-104)
         


        		
       

       

        Phenotype in ornamental plants


        
         

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