fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G14685 (BBR/BPC2, ATBPC2, BPC2)

Alias BBR/BPC2, ATBPC2, BPC2
TF Classification
FioreDBBBR_BPC (Click to show phylogenetic tree)
RARTF
AtTFDBBBR/BPC
PlnTFDBBBR/BPC (v3.0), BBR/BPC (v1.0)
DATFBBR-BPC
TAIR short description basic pentacysteine 2 (.1.2.3)
TAIR annotation Arabidopsis GBP Basic Penta Cysteine 1 (.1.2.3)
Gene model
Gene model cDNA support
AT1G14685.3 54
AT1G14685.1 44
AT1G14685.2 34
Entry clone (w/o stop) IE_06C12
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 3942: other enzyme activity ->N-acetyl-gamma-glutamyl-phosphate reductase activity
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 46983: protein binding ->protein dimerization activity
(F) 50661: other binding ->NADP binding
(P) 50793: other biological processes ->regulation of developmental process
(F) 51287: nucleotide binding ->NAD binding
(P) 55114: other metabolic processes ->oxidation-reduction process
(C) 5634: nucleus ->nucleus
(C) 5737: other cytoplasmic components ->cytoplasm
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 8652: other cellular processes ->cellular amino acid biosynthetic process
(P) 9086: other cellular processes ->methionine biosynthetic process
(P) 9088: other metabolic processes ->threonine biosynthetic process
(P) 9089: other cellular processes ->lysine biosynthetic process via diaminopimelate
(P) 9097: other metabolic processes ->isoleucine biosynthetic process
(P) 9723: other biological processes ->response to ethylene
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 6 7
soybean 1 12 13
rice
sorghum 1 2 3
physcomitrella
Total 3 20 23
Repression motif 
ATFKGNLGLQLMSTID at 21/279 in AT1G14685.3
ATFKGNLGLQLMSTID at 21/279 in AT1G14685.2
ATFKGNLGLQLMSTID at 21/279 in AT1G14685.1
Repression motif
in putative orthologs		 
TSFKSHLGLQLMSSMP at 24/283 in soybean Gm018076 (Type III)
TPVKGNLGLQLMSPTM at 27/288 in poplar Pt026989 (Type III)
TSVKGNLGLQLLSPTM at 23/283 in poplar Pt023734 (Type III)
DTVKGNLGLQLMSSAP at 22/455 in sorghum Sb022929 (Type III)
TSFKSHLGLQLMSSLP at 24/282 in soybean Gm018073 (Type III)
TSFKSHLGLQLMSSMP at 24/282 in soybean Gm025131 (Type III)
DTVKGNLGLQLMSSVP at 22/348 in sorghum Sb003060 (Type II)
TSFKSHLGLQLMSSLP at 24/282 in soybean Gm018072 (Type III)
TPVKGNLGLQLMSPTM at 27/288 in poplar Pt026988 (Type III)
TSFKSHLGLQLMSSMP at 24/282 in soybean Gm025130 (Type III)
PFRGGHLGLQLMPGIT at 21/279 in soybean Gm012346 (Type II)
TSFKSHLGLQLMSSMP at 24/283 in soybean Gm018075 (Type III)
PFRGGHLGLQLMPGMT at 21/279 in soybean Gm020733 (Type III)
TSFKSHLGLQLMSSMP at 24/282 in soybean Gm025132 (Type III)
TSFKSHLGLQLMSSMP at 24/283 in soybean Gm018074 (Type III)
TSFKSHLGLQLMSSMP at 24/282 in soybean Gm025133 (Type III)
TTVKGNLGLQLMAPTM at 23/284 in poplar Pt023765 (Type III)
TSFKSHLGLQLMSSLP at 24/282 in soybean Gm018071 (Type III)
TSFKSHLGLQLMSSMP at 24/282 in soybean Gm025129 (Type III)
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment