fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G43700 (SUE3, AtbZIP51, VIP1)

Alias SUE3, AtbZIP51, VIP1
TF Classification
FioreDBbZIP (Click to show phylogenetic tree)
RARTFbZIP / ABSCISIC ACID-INSENSITIVE5
AtTFDBbZIP
PlnTFDBbZIP (v3.0), bZIP (v1.0)
DATFbZIP
TAIR short description sulphate utilization efficiency 3, VIRE2-interacting protein 1 (.1)
TAIR annotation Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. (.1)
Gene model
Gene model cDNA support
AT1G43700.1 88
Entry clone (w/o stop) RE_01E06
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3676: nucleic acid binding ->nucleic acid binding
(F) 3682: other binding ->chromatin binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 43621: protein binding ->protein self-association
(P) 45596: other cellular processes ->negative regulation of cell differentiation
(F) 51019: protein binding ->mitogen-activated protein kinase binding
(P) 51170: transport ->nuclear import
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5829: cytosol ->cytosol
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 6952: response to stress ->defense response
(P) 6970: response to stress ->response to osmotic stress
(P) 7231: signal transduction ->osmosensory signaling pathway
(P) 8272: transport ->sulfate transport
(P) 9294: other cellular processes ->DNA mediated transformation
(P) 9652: response to abiotic or biotic stimulus ->thigmotropism
(P) 9970: other cellular processes ->cellular response to sulfate starvation
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice 1 1
sorghum 1 1
physcomitrella
Total 1 3 4
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
TVENKELKLRLQAMEQ at 243/340 in poplar Pt038481 (Type Ia)
TTENKELKLRLEALEQ at 233/330 in soybean Gm003407 (Type Ib)
TAENRELKLRLQSMEE at 224/328 in rice Os040202 (Type Ib)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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