fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G54160 (NFYA5, NF-YA5)

Alias NFYA5, NF-YA5
TF Classification
FioreDBCCAAT (Click to show phylogenetic tree)
RARTFCCAAT / HAP2 type
AtTFDBCCAAT-HAP2
PlnTFDBCCAAT (v3.0), CCAAT (v1.0)
DATFCCAAT-HAP2
TAIR short description NUCLEAR FACTOR Y A5, "nuclear factor Y, subunit A5", nuclear factor Y, subunit A5 (.1)
TAIR annotation Encodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought. (.1)
Gene model
Gene model cDNA support
AT1G54160.1 22
Entry clone (w/o stop) RE_03H01_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10262: developmental processes ->somatic embryogenesis
(C) 16602: nucleus ->CCAAT-binding factor complex
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45892: transcription,DNA-dependent ->negative regulation of transcription, DNA-templated
(P) 48316: developmental processes ->seed development
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 9414: response to abiotic or biotic stimulus ->response to water deprivation
(P) 9738: signal transduction ->abscisic acid-activated signaling pathway
(P) 9785: signal transduction ->blue light signaling pathway
(P) 9790: developmental processes ->embryo development
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR169a: 3'-AGCCGTTCAGTAGGAACCGAC-5'
5'--3'

miR169b: 3'-AGGCCGTTCAGTAGGAACCGA-5'
5'--3'

miR169c: 3'-GGCCGTTCAGTAGGAACCGAC-5'
5'--3'

miR169h: 3'-GTCCGTTCAGTAGGAACCGAT-5'
5'--3'

miR169i: 3'-GTCCGTTCAGTAGGAACCGAT-5'
5'--3'

miR169j: 3'-GTCCGTTCAGTAGGAACCGAT-5'
5'--3'

miR169k: 3'-GTCCGTTCAGTAGGAACCGAT-5'
5'--3'

miR169l: 3'-GTCCGTTCAGTAGGAACCGAT-5'
5'--3'

miR169m: 3'-GTCCGTTCAGTAGGAACCGAT-5'
5'--3'

miR169n: 3'-GTCCGTTCAGTAGGAACCGAT-5'
5'--3'

miR172a: 3'-TACGTCGTAGTAGTTCTAAGA-5'
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice 1 1
sorghum
physcomitrella
Total 1 1
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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