fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G64625 (bHLH157)

Alias bHLH157
TF Classification
FioreDBbHLH (Click to show phylogenetic tree)
RARTFbHLH / TRANSPARENT TESTA8
AtTFDBbHLH
PlnTFDB
DATF
TAIR short description Serine/threonine-protein kinase WNK (With No Lysine)-related (.1), Serine/threonine-protein kinase WNK (With No Lysine)-related (.2), Serine/threonine-protein kinase WNK (With No Lysine)-related (.3)
TAIR annotation Serine/threonine-protein kinase WNK (With No Lysine)-related; BEST Arabidopsis thaliana protein match is: transcription factor-related (TAIR:AT2G27230.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT1G64625.2 9
AT1G64625.1 7
AT1G64625.3 6
Entry clone (w/o stop) IE_05H07_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10089: other biological processes ->xylem development
(F) 16301: kinase activity ->kinase activity
(P) 16310: other cellular processes ->phosphorylation
(P) 35556: signal transduction ->intracellular signal transduction
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 4674: kinase activity ->protein serine/threonine kinase activity
(F) 46983: protein binding ->protein dimerization activity
(P) 48316: developmental processes ->seed development
(P) 51321: other cellular processes ->meiotic cell cycle
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5829: cytosol ->cytosol
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 6468: other cellular processes ->protein phosphorylation
(P) 71365: other cellular processes ->cellular response to auxin stimulus
(P) 7140: cell organization and biogenesis ->male meiotic nuclear division
(P) 90058: other biological processes ->metaxylem development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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