| Alias |
|
| TF Classification |
| FioreDB | C2H2ZnF (Click to show phylogenetic tree) |
| RARTF | C2H2(Zn) / InterPro C2H2 |
| AtTFDB | C2H2 |
| PlnTFDB | |
| DATF | |
|
| TAIR short description |
Pre-mRNA cleavage complex II (.1) |
| TAIR annotation |
Pre-mRNA cleavage complex II; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Pre-mRNA cleavage complex II (TAIR:AT5G43620.1); Has 382 Blast hits to 380 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 132; Plants - 64; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
RE_1203_x |
| External link |
|
| Gene Ontology (GO) |
| (F) 46872: other binding |
->metal ion binding |
| (C) 5634: nucleus |
->nucleus |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
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| soybean |
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| rice |
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| sorghum |
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| physcomitrella |
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| Total |
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|
0E0 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> not_yet |
|
| CRES-T phenotype from individual project
|
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| CRES-T phenotype from publication |
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| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
| ID |
Species |
Construct |
Date |
Comment |
Phenotype |
Photo |
| ID535 |
Torenia |
35S:AtCDS-SRDX |
2007-07-06 |
flower bulk, 6 lines |
no phenotype |
|
|
| Comment |
|
