Alias |
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TF Classification |
FioreDB | C2H2ZnF (Click to show phylogenetic tree) |
RARTF | C2H2(Zn) / InterPro C2H2 |
AtTFDB | C2H2 |
PlnTFDB | |
DATF | |
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TAIR short description |
Pre-mRNA cleavage complex II (.1) |
TAIR annotation |
Pre-mRNA cleavage complex II; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: Pre-mRNA cleavage complex II (TAIR:AT5G43620.1); Has 382 Blast hits to 380 proteins in 159 species: Archae - 0; Bacteria - 0; Metazoa - 108; Fungi - 132; Plants - 64; Viruses - 0; Other Eukaryotes - 78 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
RE_1203_x |
External link |
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Gene Ontology (GO) |
(F) 46872: other binding |
->metal ion binding |
(C) 5634: nucleus |
->nucleus |
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miRNA/tasiRNA |
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Orthologs |
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Type |
Ia |
Ib |
II |
III |
Total |
poplar |
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soybean |
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rice |
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sorghum |
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physcomitrella |
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Total |
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0E0 |
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Repression motif |
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Repression motif in putative orthologs |
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Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> not_yet |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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ID |
Species |
Construct |
Date |
Comment |
Phenotype |
Photo |
ID535 |
Torenia |
35S:AtCDS-SRDX |
2007-07-06 |
flower bulk, 6 lines  |
no phenotype  |
  |
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Comment |
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