fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G02450 (LOV1, ANAC034, ANAC035)

Alias LOV1, ANAC034, ANAC035
TF Classification
FioreDBNAC (Click to show phylogenetic tree)
RARTFNAC / CUP-SHAPED COTYLEDON2
AtTFDBNAC
PlnTFDBNAC (v3.0), NAC (v1.0)
DATFNAC
TAIR short description LONG VEGETATIVE PHASE 1, Arabidopsis NAC domain containing protein 34, NAC domain containing protein 35 (.1.2)
TAIR annotation LONG VEGETATIVE PHASE 1 (LOV1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 4817 Blast hits to 4369 proteins in 130 species: Archae - 0; Bacteria - 5; Metazoa - 115; Fungi - 57; Plants - 2924; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT2G02450.1 12
AT2G02450.2 9
Entry clone (w/o stop) RE_0610_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 7275: developmental processes ->multicellular organism development
(P) 9908: developmental processes ->flower development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean 2 2
rice 1 1 1 3
sorghum 1 1 1 3
physcomitrella 1 1
Total 3 1 4 3 11
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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