| Alias |
|
| TF Classification |
| FioreDB | MYB (Click to show phylogenetic tree) |
| RARTF | ARID |
| AtTFDB | |
| PlnTFDB | MYB-related (v3.0), MYB-related (v1.0) |
| DATF | |
|
| TAIR short description |
ELM2 domain-containing protein (.1.2) |
| TAIR annotation |
ELM2 domain-containing protein; FUNCTIONS IN: DNA binding; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), ELM2 (InterPro:IPR000949); BEST Arabidopsis thaliana protein match is: ELM2 domain-containing protein (TAIR:AT1G13880.1); Has 3810 Blast hits to 2751 proteins in 251 species: Archae - 13; Bacteria - 211; Metazoa - 978; Fungi - 430; Plants - 279; Viruses - 101; Other Eukaryotes - 1798 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
RE_1365_x |
| External link |
|
| Gene Ontology (GO) |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (C) 5634: nucleus |
->nucleus |
|
| miRNA/tasiRNA |
| Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
| miR777: 3'-TTCGTTGCTTTGAGTTACGCAT-5' |
|
 |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
|
|
|
|
| soybean |
|
1 |
|
|
1 |
| rice |
|
|
|
|
|
| sorghum |
|
|
|
|
|
| physcomitrella |
|
|
|
|
|
| Total |
|
1 |
|
|
1 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> done |
|
| CRES-T phenotype from individual project
|
|
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
| Comment |
|
