Alias |
AMS, bHLH021 |
TF Classification |
FioreDB | bHLH (Click to show phylogenetic tree) |
RARTF | bHLH / TRANSPARENT TESTA8 |
AtTFDB | bHLH |
PlnTFDB | bHLH (v3.0), bHLH (v1.0) |
DATF | bHLH |
|
TAIR short description |
ABORTED MICROSPORES, basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1) |
TAIR annotation |
Encodes a basic helix-loop helix transcription factor involved in tapetal cell development. Loss of function mutations are male sterile. AMS binds to a region termed the E box of target gene promoters. (.1) |
Gene model |
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Entry clone (w/o stop) |
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External link |
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Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3682: other binding |
->chromatin binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 46983: protein binding |
->protein dimerization activity |
(P) 48658: developmental processes |
->anther wall tapetum development |
(F) 5515: protein binding |
->protein binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
(P) 9555: developmental processes |
->pollen development |
(F) 978: nucleic acid binding |
->RNA polymerase II core promoter proximal region sequence-specific DNA binding |
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miRNA/tasiRNA |
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Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
1 |
|
|
|
1 |
soybean |
1 |
|
|
|
1 |
rice |
|
1 |
|
|
1 |
sorghum |
|
1 |
|
|
1 |
physcomitrella |
|
1 |
|
|
1 |
Total |
2 |
3 |
|
|
5 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> The work interrupted(05Jul) |
Plasmid construction | -> The work interrupted(05Jul) |
Transformed | -> not_yet |
T1 seed harvested | -> not_yet |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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