fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G36270 (EEL, GIA1, ABI5)

Alias EEL, GIA1, ABI5
TF Classification
FioreDBbZIP (Click to show phylogenetic tree)
RARTFbZIP / ABSCISIC ACID-INSENSITIVE5
AtTFDBbZIP
PlnTFDBbZIP (v3.0), bZIP (v1.0)
DATFbZIP
TAIR short description GROWTH-INSENSITIVITY TO ABA 1, ABA INSENSITIVE 5, Basic-leucine zipper (bZIP) transcription factor family protein (.1)
TAIR annotation Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages. (.1)
Gene model
Gene model cDNA support
AT2G36270.1 30
Entry clone (w/o stop) RE_0330_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10182: signal transduction ->sugar mediated signaling pathway
(P) 10187: developmental processes ->negative regulation of seed germination
(P) 10200: other biological processes ->response to chitin
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 45893: other metabolic processes ->positive regulation of transcription, DNA-templated
(P) 48316: developmental processes ->seed development
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9414: response to stress ->response to water deprivation
(P) 9651: response to abiotic or biotic stimulus ->response to salt stress
(P) 9737: other biological processes ->response to abscisic acid
(P) 9738: signal transduction ->abscisic acid-activated signaling pathway
(P) 9739: other biological processes ->response to gibberellin
(P) 9845: developmental processes ->seed germination
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1 2
rice
sorghum 1 1
physcomitrella
Total 2 1 1 4
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
KEENGQLKLALADLER at 400/447 in soybean Gm027051 (Type Ia)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

         sterile or low fertility (A20595), 
         abnormal shaped silique (A20595), 
         adventitious shoot formation (04043, direct input), 
         short pedicel (A20595), 
         too many rosettes (A20595)
        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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