Alias |
ZFN1 |
TF Classification |
|
TAIR short description |
zinc finger protein 1 (.1) |
TAIR annotation |
Encodes a zinc finger protein. (.1) |
Gene model |
|
Entry clone (w/o stop) |
RE_0668 |
External link |
|
Gene Ontology (GO) |
(F) 10313: protein binding |
->phytochrome binding |
(P) 17148: other cellular processes |
->negative regulation of translation |
(F) 3676: nucleic acid binding |
->nucleic acid binding |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3729: DNA or RNA binding |
->mRNA binding |
(F) 4518: hydrolase activity |
->nuclease activity |
(F) 46872: other binding |
->metal ion binding |
(F) 48027: DNA or RNA binding |
->mRNA 5-UTR binding |
(C) 5634: nucleus |
->nucleus |
(C) 5829: cytosol |
->cytosol |
|
miRNA/tasiRNA |
Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5' |
|
|
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
1 |
|
1 |
|
2 |
soybean |
1 |
|
6 |
|
7 |
rice |
1 |
|
3 |
|
4 |
sorghum |
1 |
|
|
|
1 |
physcomitrella |
|
|
|
|
|
Total |
4 |
|
10 |
|
14 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
Comment |
|