fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
>>AT3G02990 (ATHSFA1E)
Alias
ATHSFA1E
TF Classification
FioreDB
HSF
(Click to show phylogenetic tree)
RARTF
HSF
AtTFDB
HSF
PlnTFDB
HSF
(v3.0), HSF (v1.0)
DATF
HSF
TAIR short description
heat shock transcription factor A1E (.1)
TAIR annotation
member of Heat Stress Transcription Factor (Hsf) family (.1)
Gene model
Gene model
cDNA support
AT3G02990.1
7
Entry clone (w/o stop)
RE_0945
External link
General info
TAIR DATA
Genomic seq
TAIR seq viewer
SNP
SALK SNP Viewer
T-DNA tag line
T-DNA Express
miRNA
Search ASRP
Phylogeny
SALAD database
Promoter
ppdb
Microarray data
FioreDB
ATTED-II
ATTED-II data
NCBI GEO
NCBI GEO profile
NASC
NASCarray_SpotHistory
NASCarray_DigitalNorthern
Genevestigator
Genevestigator
eFP Browser
Developmental Map
Abiotic Stress
AtGenExpress
Development
Hormone
Abiotic Stress
Light
Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding
->sequence-specific DNA binding
(C) 5634: nucleus
->nucleus
(C) 5737: other cytoplasmic components
->cytoplasm
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: other cellular processes
->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
1
2
soybean
1
2
3
rice
1
1
2
sorghum
1
1
physcomitrella
Total
4
4
8
Repression motif
Repression motif
in putative orthologs
PCRGS
SLGLAL
CQRKL at 396/693 in sorghum
Sb019762
(Type II)
Status
Plasmid construction
-> done
Plasmid construction
-> done
Transformed
-> done
T1 seed harvested
-> done
T2 seed harvested
-> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment