fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G10490 (ANAC051, ANAC052)

Alias ANAC051, ANAC052
TF Classification
FioreDBNAC (Click to show phylogenetic tree)
RARTFNAC / CUP-SHAPED COTYLEDON2
AtTFDBNAC
PlnTFDBNAC (v3.0), NAC (v1.0)
DATFNAC
TAIR short description Arabidopsis NAC domain containing protein 51, NAC domain containing protein 52 (.1.2)
TAIR annotation Arabidopsis NAC domain containing protein 51 (ANAC051); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, pollen development; LOCATED IN: nucleolus; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 50 (TAIR:AT3G10480.1); Has 3001 Blast hits to 2994 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3001; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT3G10490.2 55
AT3G10490.1 50
Entry clone (w/o stop) RE_0622_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10228: developmental processes ->vegetative to reproductive phase transition of meristem
(P) 10267: other cellular processes ->production of ta-siRNAs involved in RNA interference
(P) 16441: other metabolic processes ->posttranscriptional gene silencing
(P) 2237: response to abiotic or biotic stimulus ->response to molecule of bacterial origin
(P) 34720: protein metabolism ->histone H3-K4 demethylation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 45892: other cellular processes ->negative regulation of transcription, DNA-templated
(P) 48573: response to abiotic or biotic stimulus ->photoperiodism, flowering
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5730: nucleus ->nucleolus
(P) 60966: other metabolic processes ->regulation of gene silencing by RNA
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 7275: developmental processes ->multicellular organism development
(P) 9555: developmental processes ->pollen development
(F) 976: nucleic acid binding ->transcription regulatory region sequence-specific DNA binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1 2
rice
sorghum
physcomitrella
Total 2 1 3
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
SSQEQQLRLALTTPAP at 11/440 in poplar Pt034332 (Type II)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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