fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G15510 (ATNAC2, ANAC056, NARS1)

Alias ATNAC2, ANAC056, NARS1
TF Classification
FioreDBNAC (Click to show phylogenetic tree)
RARTFNAC / CUP-SHAPED COTYLEDON2
AtTFDBNAC
PlnTFDBNAC (v3.0), NAC (v1.0)
DATFNAC
TAIR short description NAC-REGULATED SEED MORPHOLOGY 1, Arabidopsis NAC domain containing protein 56, NAC domain containing protein 2 (.1)
TAIR annotation Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2. (.1)
Gene model
Gene model cDNA support
AT3G15510.1 32
Entry clone (w/o stop) RE_0628_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 45995: developmental processes ->regulation of embryonic development
(P) 48317: developmental processes ->seed morphogenesis
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 7275: developmental processes ->multicellular organism development
(P) 80060: developmental processes ->integument development
(P) 9753: other biological processes ->response to jasmonic acid
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2 4
soybean 1 3 4
rice
sorghum 1 1
physcomitrella
Total 3 4 2 9
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        

         abnormal shaped seed (direct input), 
         abnormal stem (direct input)


        		
       

       

        CRES-T phenotype from publication
        
embryonic lethal, abnormal shaped seed (PMID18849494)
        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID529
           Torenia
           35S:AtCDS-SRDX
           2007-07-06
           flower bulk, 3 lines 
           a boundary between two colors shifted to distal position. an elongated dorsal petal. 
[Publication link]		
           
          

         

         

          Comment