| Alias |
|
| TF Classification |
| FioreDB | C3HZnF (Click to show phylogenetic tree) |
| RARTF | |
| AtTFDB | |
| PlnTFDB | C3H (v3.0), C3H (v1.0) |
| DATF | |
|
| TAIR short description |
Zinc finger C-x8-C-x5-C-x3-H type family protein (.1) |
| TAIR annotation |
Zinc finger C-x8-C-x5-C-x3-H type family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, CCCH-type (InterPro:IPR000571); BEST Arabidopsis thaliana protein match is: histone-lysine N-methyltransferases (TAIR:AT3G26850.2); Has 2096 Blast hits to 1919 proteins in 216 species: Archae - 1; Bacteria - 45; Metazoa - 857; Fungi - 199; Plants - 205; Viruses - 43; Other Eukaryotes - 746 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
|
| External link |
|
| Gene Ontology (GO) |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 46872: other binding |
->metal ion binding |
| (C) 5634: nucleus |
->nucleus |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
1 |
|
|
1 |
| soybean |
|
1 |
|
|
1 |
| rice |
|
1 |
|
|
1 |
| sorghum |
|
|
|
|
|
| physcomitrella |
|
|
|
|
|
| Total |
|
3 |
|
|
3 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> not_yet |
| Plasmid construction | -> not_yet |
| Transformed | -> not_yet |
| T1 seed harvested | -> not_yet |
| T2 seed harvested | -> not_yet |
|
| CRES-T phenotype from individual project
|
|
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
| Comment |
|
