Alias |
TMO5, BHLH32, bHLH032, ATAIG1 |
TF Classification |
FioreDB | bHLH (Click to show phylogenetic tree) |
RARTF | bHLH / TRANSPARENT TESTA8 |
AtTFDB | bHLH |
PlnTFDB | bHLH (v3.0), bHLH (v1.0) |
DATF | bHLH |
|
TAIR short description |
TARGET OF MONOPTEROS 5, basic helix-loop-helix 32 (.1) |
TAIR annotation |
Encodes a basic helixloophelix transcription factor that is expressed in the hypophysis-adjacent embryo cells, and is required and partially sufficient for MP-dependent root initiation. Involved in response to phosphate starvation. Negative regulator of root hair development, anthocyanin formation and Pi content. (.1) |
Gene model |
|
Entry clone (w/o stop) |
RE_0247 |
External link |
|
Gene Ontology (GO) |
(P) 16036: response to stress |
->cellular response to phosphate starvation |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 46983: protein binding |
->protein dimerization activity |
(P) 48364: developmental processes |
->root development |
(F) 5515: protein binding |
->protein binding |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: transcription,DNA-dependent |
->regulation of transcription, DNA-templated |
(P) 80147: other cellular processes |
->root hair cell development |
(P) 9718: other metabolic processes |
->anthocyanin-containing compound biosynthetic process |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
|
1 |
1 |
2 |
soybean |
|
|
|
|
|
rice |
|
|
|
|
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sorghum |
|
|
|
|
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physcomitrella |
|
|
|
|
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Total |
|
|
1 |
1 |
2 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
|
wavy leaf, asymmetric leaf, stem fusion
asynmetric cotyledon (direct input),
rough surface leaf (direct input),
fused stem (direct input)
|
CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
slow growth
(A20584-86)
abnormal leaf
(A20265-148)
slow growth,
too large leaf
(A20585-128)
|
Phenotype in ornamental plants
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Comment |
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