Alias |
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TF Classification |
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TAIR short description |
C2H2-type zinc finger family protein (.1) |
TAIR annotation |
C2H2-type zinc finger family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: response to chitin, regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT2G37430.1); Has 959 Blast hits to 927 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 153; Fungi - 2; Plants - 801; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). (.1) |
Gene model |
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Entry clone (w/o stop) |
IE_01F12 |
External link |
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Gene Ontology (GO) |
(P) 10200: other biological processes |
->response to chitin |
(F) 3676: nucleic acid binding |
->nucleic acid binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(P) 42631: other cellular processes |
->cellular response to water deprivation |
(C) 5634: nucleus |
->nucleus |
(P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
(F) 8270: other binding |
->zinc ion binding |
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miRNA/tasiRNA |
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Orthologs |
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Type |
Ia |
Ib |
II |
III |
Total |
poplar |
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soybean |
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rice |
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sorghum |
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physcomitrella |
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Total |
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0E0 |
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Repression motif |
SSKEILDLNLTPLENDL at 145/175 in AT3G53600.1
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Repression motif in putative orthologs |
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Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
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CRES-T phenotype from individual project
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CRES-T phenotype from publication |
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CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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Comment |
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