fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT3G61150 (HD-GL2-1, HDG1)

Alias HD-GL2-1, HDG1
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / ANTHOCYANINLESS2
AtTFDBHomeobox / HD-Zip IV
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description HOMEODOMAIN-GLABRA2 1, homeodomain GLABROUS 1 (.1)
TAIR annotation Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. (.1)
Gene model
Gene model cDNA support
AT3G61150.1 56
Entry clone (w/o stop) IE_0079
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 48497: developmental processes ->maintenance of floral organ identity
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(F) 8289: other binding ->lipid binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 9 10
soybean 1 15 16
rice 1 2 3
sorghum 2 5 7
physcomitrella 1 3 4
Total 6 34 40
Repression motif
PFSSSGLSLGLQTNGE at 51/808 in AT3G61150.1
Repression motif
in putative orthologs
MFNSPGLSLALQSDID at 57/820 in soybean Gm026113 (Type II)
GESRTHLRLSLPCGAH at 889/1026 in sorghum Sb030572 (Type III)
GIGGPSLDLDLIPTSS at 191/707 in poplar Pt027687 (Type III)
MFNSPGLSLALQQPNI at 54/823 in poplar Pt018110 (Type II)
GIGGPSLDLDLIPTSS at 191/725 in poplar Pt027686 (Type III)
FTSSPALSLALADAVA at 18/806 in rice Os018491 (Type III)
GLGGPSLDLDLLPGSS at 189/722 in soybean Gm025110 (Type III)
PALGPSLDLDLLSGGS at 181/707 in sorghum Sb011181 (Type III)
GFGATGLSLGLQTNME at 50/1043 in sorghum Sb023592 (Type III)
PLGYMALCLRLCSVII at 1032/1043 in sorghum Sb023592 (Type III)
GLGGPSLDLDLLPGSS at 189/718 in soybean Gm045465 (Type III)
MFNSPGLSLALQTSID at 71/835 in soybean Gm005897 (Type III)
MFNSPGLSLALQQPNI at 55/820 in poplar Pt039764 (Type III)
FASSPALSLALDNAGG at 28/804 in rice Os009241 (Type II)
FSSSPALSLGLDNAGG at 32/987 in sorghum Sb024877 (Type II)

        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo
–{—tŠÛ‚¢(6/35), ‰Ô•Ù’Z‚¢(6/35), ‚‚ڂݏ¬‚³‚¢(7/35), ‚³‚â•Î•½‚łЂ傤–Ê‚Ú‚±‚Ú‚±, ¬‚³‚È“Ë‹N‚ ‚è(7/35), ‰ÔŒs‚Ì’¸‰è—D¨Žã(6/35), ’¸‚½‚ñ‚̉ԗZ‡(1/35), (phenotype_A20024,A20029:leaf_ŠÛ‚¢/flower_‰Ô•Ù’Z‚¢/silique_•Î•½‚Å‚²‚‚²‚Â/stem_‘½‚¢)
abnormal shaped leaf (A20024, A20029), abnormal petal (A20024, A20029), loss of apical dominance (A20024, A20029), abnormal shaped silique (A20024, A20029)
and more...
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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