Alias
HAT1
TF Classification
FioreDB HD (Click to show phylogenetic tree)
RARTF HB / ATHB-2
AtTFDB Homeobox / HD-Zip II
PlnTFDB HB (v3.0), HB (v1.0)
DATF HB
TAIR short description
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein (.1)
TAIR annotation
Encodes homeobox protein HAT1. (.1)
Gene model
Entry clone (w/o stop)
RE_0560
External link
Gene Ontology (GO)
(P) 10582: developmental processes
->floral meristem determinacy
(P) 3006: other biological processes
->developmental process involved in reproduction
(F) 3677: DNA or RNA binding
->DNA binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding
->sequence-specific DNA binding
(F) 43621: protein binding
->protein self-association
(P) 48467: developmental processes
->gynoecium development
(P) 48507: other biological processes
->meristem development
(F) 5515: protein binding
->protein binding
(C) 5634: nucleus
->nucleus
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: other metabolic processes
->regulation of transcription, DNA-templated
(P) 80127: developmental processes
->fruit septum development
miRNA/tasiRNA
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
4
5
soybean
1
4
5
rice
sorghum
physcomitrella
Total
2
8
10
Repression motif
MMGKEDLGLSL SLGFA at 6/282 in AT4G17460.1
Repression motif in putative orthologs
MAEKEDLGLSL SLSVP at 8/305 in poplar Pt011705 (Type III)
GDKNDGLGLSL SLGYA at 7/295 in poplar Pt040049 (Type III)
HHQQPSLKLNL MPLAS at 27/295 in poplar Pt040049 (Type III)
GEKDDGLGLGL SLKLG at 7/308 in soybean Gm018184 (Type III)
MVQKEDLGLSL SLNFP at 7/299 in soybean Gm047093 (Type III)
MVQKEDLGLSL SLNFP at 7/296 in soybean Gm011449 (Type III)
TVEKEDLGLSL SLSFP at 7/285 in soybean Gm029715 (Type II)
QNPPTHLHLNL VSSSP at 23/285 in soybean Gm029715 (Type II)
MAEKEDLGLSL SLSVP at 8/305 in poplar Pt011704 (Type III)
GDKNDGLGLSL SLGFD at 7/298 in poplar Pt017318 (Type III)
HQQQPSLKLNL MPVPS at 28/298 in poplar Pt017318 (Type III)
MAGKEDLGLSL SLSVP at 7/302 in poplar Pt032091 (Type II)
QNQHSLQLNL MPSLV at 22/302 in poplar Pt032091 (Type II)
MVQKEDLGLSL SLNFP at 7/298 in soybean Gm011448 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo
—cA•¨ŠúFŽq—tE–{—t¬‚³‚¢(26/138), ª—Ή»(9/138), –{—tF×’·‚¢(22/70), Œ`‚¢‚Ñ‚Â(18/70), —t•¿—Z‡(4/70), ‰ÔF‚â‚⬂³‚‚ÄŒ`‚®‚µ‚á‚®‚µ‚á(5/70), ‚â‚â‘å‚«‚¢(10/70), ‚³‚âF‰ºŒü‚«(13/70), ‰ÔŒsF‘ç‚«(5/70), ‚³‚â‚ÌŠÔŠu‚Ü‚¿‚Ü‚¿(19/70), ’¸‰Ô—Z‡(11/70), A•¨‘ÌF‹É¬‚¾‚ªA—t‚ª×’·‚‰Ô‚ ‚è(3/70), (phenotype_A20116:leaf_‚Ö‚çŒ`/flower_‘å‚«‚¢/silique_•s–«/stem_”w‚/’¸‰Ô—Z‡/‚³‚≺Œü‚«/‘ç‚«/‚³‚âŠÔŠu‚Ü‚¿‚Ü‚¿)(phenotype_A20130:leaf_‚Ö‚çŒ`/flower_¬‚³‚‚Ä‚®‚µ‚á‚®‚µ‚á/silique_•s–«/’¸‰Ô—Z‡/‚³‚≺Œü‚«/ƒƒ[ƒbƒg¬)
narrow leaf (direct input),
sterile or low fertility (A20130, A20116),
abnormal flower (A20116, A20130),
early flowering (A20116),
abnormal shaped leaf (A20116, A20130),
tall height (A20116),
abnormal silique (A20116)
and more...
CRES-T phenotype from publication
CRES-T phenotype from bulk project
abnormal flower
(A20941-32)
dark green leaf ,
narrow leaf
(A20942-66)
Phenotype in ornamental plants
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