fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G18020 (APRR2)

Alias APRR2
TF Classification
FioreDBGARP (Click to show phylogenetic tree)
RARTFGARP / ARR-B class
AtTFDBG2-like
PlnTFDBARR-B (v3.0), ARR-B (v1.0)
DATFGARP-G2-like
TAIR short description PSEUDO-RESPONSE REGULATOR 2, CheY-like two-component responsive regulator family protein (.1.2.3.4.5.6)
TAIR annotation Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). (.1), Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). (.2), Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). (.3), Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). (.4), Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). (.5), Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9). (.6)
Gene model
Gene model cDNA support
AT4G18020.6 55
AT4G18020.1 55
AT4G18020.2 54
AT4G18020.3 54
AT4G18020.5 30
AT4G18020.4 30
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 156: other molecular functions ->phosphorelay response regulator activity
(P) 160: signal transduction ->phosphorelay signal transduction system
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 7623: other biological processes ->circadian rhythm
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR834: 3'-AATGGTGGCGATGACGATGGT-5'
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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