fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT4G28610 (ATPHR1, PHR1)

Alias ATPHR1, PHR1
TF Classification
FioreDBGARP (Click to show phylogenetic tree)
RARTFGARP / G2-like
AtTFDBG2-like
PlnTFDBG2-like (v3.0), G2-like (v1.0)
DATFGARP-G2-like
TAIR short description phosphate starvation response 1 (.1)
TAIR annotation Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling. (.1)
Gene model
Gene model cDNA support
AT4G28610.1 51
Entry clone (w/o stop) RE_0872
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 16036: other cellular processes ->cellular response to phosphate starvation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 55063: other biological processes ->sulfate ion homeostasis
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
(P) 71486: response to abiotic or biotic stimulus ->cellular response to high light intensity
(P) 7623: other biological processes ->circadian rhythm
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 3 4
soybean 1 1 2
rice 1 1
sorghum
physcomitrella
Total 2 1 4 7
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
FDLTEALRLQLELQKR at 337/426 in rice Os027883 (Type Ib)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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