| Alias |
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| TF Classification |
| FioreDB | C2H2ZnF (Click to show phylogenetic tree) |
| RARTF | C2H2(Zn) / InterPro C2H2 |
| AtTFDB | |
| PlnTFDB | |
| DATF | C2H2 |
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| TAIR short description |
zinc finger (C2H2 type) family protein (.1) |
| TAIR annotation |
zinc finger (C2H2 type) family protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT4G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). (.1) |
| Gene model |
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| Entry clone (w/o stop) |
IE_03C03 |
| External link |
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| Gene Ontology (GO) |
| (F) 3676: nucleic acid binding |
->nucleic acid binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (F) 5515: protein binding |
->protein binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
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| miRNA/tasiRNA |
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| Orthologs |
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Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
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| soybean |
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| rice |
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| sorghum |
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| physcomitrella |
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| Total |
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0E0 |
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| Repression motif |
GRGSGIDLNVEPVEQVE at 231/271 in AT4G35610.1
GCIAKFDLNKSPPKDEEE at 253/271 in AT4G35610.1
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> not_yet |
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| CRES-T phenotype from individual project
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| CRES-T phenotype from publication |
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| CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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| Comment |
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