fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G01840 (AtOFP1)

Alias AtOFP1
TF Classification
FioreDBOFP (Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDBOFP (v3.0)
DATF
TAIR short description ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 1, ovate family protein 1 (.1)
TAIR annotation Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation. (.1)
Gene model
Gene model cDNA support
AT5G01840.1 7
Entry clone (w/o stop) IE_0033
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(P) 45892: transcription,DNA-dependent ->negative regulation of transcription, DNA-templated
(P) 51510: cell organization and biogenesis ->regulation of unidimensional cell growth
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(C) 5730: other intracellular components ->nucleolus
(C) 5856: other intracellular components ->cytoskeleton
(P) 6281: DNA or RNA metabolism ->DNA repair
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean 1 1
rice
sorghum
physcomitrella
Total 1 1
Repression motif
FKQIWLDLNLPPPHSK at 259/270 in AT5G01840.1
Repression motif
in putative orthologs
        
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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