| Alias |
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| TF Classification |
| FioreDB | C2H2ZnF (Click to show phylogenetic tree) |
| RARTF | C2H2(Zn) / InterPro C2H2 |
| AtTFDB | C2H2 |
| PlnTFDB | |
| DATF | |
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| TAIR short description |
Protein with domains of unknown function (DUF627 and DUF629) (.1) |
| TAIR annotation |
FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Protein of unknown function DUF627 (InterPro:IPR006866), Zinc finger, C2H2-type (InterPro:IPR007087), Protein of unknown function DUF629 (InterPro:IPR006865); BEST Arabidopsis thaliana protein match is: Ubiquitin carboxyl-terminal hydrolase-related protein (TAIR:AT1G65200.1); Has 108 Blast hits to 108 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). (.1) |
| Gene model |
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| Entry clone (w/o stop) |
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| External link |
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| Gene Ontology (GO) |
| (F) 16787: hydrolase activity |
->hydrolase activity |
| (F) 3676: nucleic acid binding |
->nucleic acid binding |
| (C) 5634: nucleus |
->nucleus |
| (C) 5739: mitochondria |
->mitochondrion |
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| miRNA/tasiRNA |
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| Orthologs |
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Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
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| soybean |
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| rice |
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| sorghum |
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| physcomitrella |
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| Total |
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0E0 |
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| Repression motif |
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Repression motif
in putative orthologs |
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| Status |
| Plasmid construction | -> not_yet |
| Plasmid construction | -> not_yet |
| Transformed | -> not_yet |
| T1 seed harvested | -> not_yet |
| T2 seed harvested | -> not_yet |
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| CRES-T phenotype from individual project
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| CRES-T phenotype from publication |
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| CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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| Comment |
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