| Alias |
TCP6 |
| TF Classification |
| FioreDB | TCP (Click to show phylogenetic tree) |
| RARTF | TCP |
| AtTFDB | TCP |
| PlnTFDB | TCP (v3.0), TCP (v1.0) |
| DATF | TCP |
|
| TAIR short description |
TCP family transcription factor (.1) |
| TAIR annotation |
TCP family transcription factor ; CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 (TAIR:AT3G27010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
IE_08B09 |
| External link |
|
| Gene Ontology (GO) |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
| (P) 6355: transcription,DNA-dependent |
->regulation of transcription, DNA-templated |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
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| soybean |
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| rice |
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| sorghum |
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| physcomitrella |
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| Total |
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|
0E0 |
|
| Repression motif |
DNQTPGLELRLSQVGV at 198/243 in AT5G41030.1
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> done |
|
| CRES-T phenotype from individual project
|
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| CRES-T phenotype from publication |
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| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
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| Comment |
ng2011, it has deletion |
