| Alias |
TOE2 |
| TF Classification |
|
| TAIR short description |
target of early activation tagged (EAT) 2 (.1), target of early activation tagged (EAT) 2 (.2) |
| TAIR annotation |
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
RE_0141_x |
| External link |
|
| Gene Ontology (GO) |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (F) 5515: protein binding |
->protein binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
| (P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
| (P) 7275: developmental processes |
->multicellular organism development |
| (P) 9873: other cellular processes |
->ethylene-activated signaling pathway |
|
| miRNA/tasiRNA |
| Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
| miR172a: 3'-TACGTCGTAGTAGTTCTAAGA-5' |
|
 |
5'--3'
|
| miR172b: 3'-TACGTCGTAGTAGTTCTAAGA-5' |
|
|
5'--3'
|
| miR172c: 3'-GACGTCGTAGTAGTTCTAAGA-5' |
|
|
5'--3'
|
| miR172d: 3'-GACGTCGTAGTAGTTCTAAGA-5' |
|
|
5'--3'
|
| miR172e: 3'-TACGTCGTAGTAGTTCTAAGG-5' |
|
|
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
|
|
|
|
| soybean |
|
|
|
|
|
| rice |
|
|
|
|
|
| sorghum |
|
|
|
|
|
| physcomitrella |
|
|
|
|
|
| Total |
|
|
|
|
0E0 |
|
| Repression motif |
MLDLNLDVDST at 0/485 in AT5G60120.1
EAANVKLDLNLGISLS at 307/485 in AT5G60120.1
MLDLNLDVDST at 0/507 in AT5G60120.2
EAANVKLDLNLGISLS at 307/507 in AT5G60120.2
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> |
| Plasmid construction | -> |
| Transformed | -> not_yet |
| T1 seed harvested | -> done |
| T2 seed harvested | -> done |
|
| CRES-T phenotype from individual project
|
|
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
| Comment |
|
