fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G63090 (LOBB, LOB)

Alias LOBB, LOB
TF Classification
FioreDBAS2 (Click to show phylogenetic tree)
RARTF
AtTFDB
PlnTFDBLOB (v3.0)
DATFAS2
TAIR short description Lateral organ boundaries (LOB) domain family protein (.1), Lateral organ boundaries (LOB) domain family protein (.2), Lateral organ boundaries (LOB) domain family protein (.3), Lateral organ boundaries (LOB) domain family protein (.4)
TAIR annotation Involved in lateral organ development (.1.2.3.4)
Gene model
Gene model cDNA support
AT5G63090.1 6
AT5G63090.2 5
AT5G63090.4 5
AT5G63090.3 5
Entry clone (w/o stop)
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10199: other biological processes ->organ boundary specification between lateral organs and the meristem
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 7275: developmental processes ->multicellular organism development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 15 16
soybean 1 31 32
rice 1 7 8
sorghum 1 7 8
physcomitrella 1 9 10
Total 5 69 74
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
APSIPALHLRLPTALC at 247/337 in sorghum Sb032110 (Type III)
NHIPHRLGLGLGGVLN at 55/260 in sorghum Sb008940 (Type III)
GAPPPRLRLRLLHLRP at 198/418 in sorghum Sb020619 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> not_yet

          
Plasmid construction -> not_yet

          
Transformed -> not_yet

          
T1 seed harvested -> not_yet

          
T2 seed harvested -> not_yet

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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