fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G65310 (ATHB-5, ATHB5)

Alias ATHB-5, ATHB5
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / GLABRA2
AtTFDBHomeobox / HD-Zip I
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description homeobox protein 5 (.1.2)
TAIR annotation Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. (.1), Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment. (.2)
Gene model
Gene model cDNA support
AT5G65310.1 102
AT5G65310.2 64
Entry clone (w/o stop) RE_0580
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 42803: protein binding ->protein homodimerization activity
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(P) 45893: other cellular processes ->positive regulation of transcription, DNA-templated
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 9737: other biological processes ->response to abscisic acid
(P) 9738: other cellular processes ->abscisic acid-activated signaling pathway
(P) 9787: signal transduction ->regulation of abscisic acid-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1 2
soybean
rice 1 1
sorghum
physcomitrella
Total 1 1 1 3
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        –{—t×’·‚­‚Ö‚çŒ^‚Å‚Ë‚¶‚ê‚ ‚è(19/71), ’¸‚½‚ñ‚̉ԗZ‡(20/71), ‰Ô•Ù’Z‚¢(8/71), ‚³‚â‹È‚ª‚è—L(19/71), ”w‚‚¢(28/71), (phenotype_A20014:leaf_×’·E‚Ö‚çŒ`E‚Ë‚¶‚ê/silique_‹È‚ª‚è/stem_”w‚/’¸‰Ô—Z‡/dwarf)(phenotype_A20021:leaf_×’·E‚Ö‚çŒ`E‚Ë‚¶‚ê/flower_‰Ô•Ù’Z‚¢/silique_‹È‚ª‚è/stem_”w‚/’¸‰Ô—Z‡/dwarf)

         tall height (direct input, A20014, A20021), 
         dwarf (A20014, A20021), 
         abnormal shaped silique (A20014, A20021), 
         abnormal shaped leaf (A20014, A20021), 
         narrow leaf (A20014, A20021), 
         abnormal flower (A20014, A20021), 
         abnormal petal (A20021)


 and more...        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         narrow leaf, 
         abnormal leaf 
         (A20250-43)
         

         abnormal shaped leaf 
         (A20604-80)
         

         twisted petiole 
         (A20270-118)
         

         
         

         abnormal shaped leaf 
         (A20604-71)
         


        		
       

       

        Phenotype in ornamental plants


        
         

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