| Alias |
ATHB53, HB53, HB-8 |
| TF Classification |
| FioreDB | HD (Click to show phylogenetic tree) |
| RARTF | HB / ANTHOCYANINLESS2 |
| AtTFDB | Homeobox / HD-Zip I |
| PlnTFDB | HB (v3.0), HB (v1.0) |
| DATF | HB |
|
| TAIR short description |
HOMEOBOX-8, ARABIDOPSIS THALIANA HOMEOBOX 53, homeobox 53 (.1) |
| TAIR annotation |
Encodes a homeodomain protein. Member of HD-ZIP 1 family, most closely related to HB5. AtHB53 is auxin-inducible and its induction is inhibited by cytokinin, especially in roots therefore may be involved in root development. (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
|
| External link |
|
| Gene Ontology (GO) |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (F) 43565: DNA or RNA binding |
->sequence-specific DNA binding |
| (P) 48364: developmental processes |
->root development |
| (C) 5634: nucleus |
->nucleus |
| (P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
| (P) 6355: transcription,DNA-dependent |
->regulation of transcription, DNA-templated |
| (P) 9733: other biological processes |
->response to auxin |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
|
1 |
1 |
2 |
| soybean |
|
|
1 |
|
1 |
| rice |
|
|
|
|
|
| sorghum |
|
|
|
|
|
| physcomitrella |
|
|
|
|
|
| Total |
|
|
2 |
1 |
3 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> done |
|
| CRES-T phenotype from individual project
|
|
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
| Comment |
|
