fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G09710

Alias
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / WEREWOLF
AtTFDB
PlnTFDBMYB-related (v3.0), MYB-related (v1.0)
DATFMYB-related
TAIR short description Homeodomain-like superfamily protein (.1.2)
TAIR annotation Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT1G58220.1); Has 2083 Blast hits to 515 proteins in 153 species: Archae - 0; Bacteria - 81; Metazoa - 329; Fungi - 153; Plants - 69; Viruses - 0; Other Eukaryotes - 1451 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT1G09710.1 23
AT1G09710.2 18
Entry clone (w/o stop) IE_05A11_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(C) 5634: nucleus ->nucleus
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar
soybean 1 1
rice 1 1
sorghum
physcomitrella
Total 2 2
Repression motif 
LAVNHALSLALGNRPP at 273/610 in AT1G09710.1
LAVNHALSLALGNRPP at 273/650 in AT1G09710.2
Repression motif
in putative orthologs		 
LATRHSLSLALDMPFK at 284/613 in soybean Gm014660 (Type Ib)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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