fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G18330 (RVE7, EPR1)

Alias RVE7, EPR1
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / CIRCADIAN CLOCK ASSOCIATED 1
AtTFDB
PlnTFDBMYB-related (v3.0), MYB-related (v1.0)
DATFMYB-related
TAIR short description REVEILLE 7, EARLY-PHYTOCHROME-RESPONSIVE1, Homeodomain-like superfamily protein (.1.2)
TAIR annotation EARLY-PHYTOCHROME-RESPONSIVE1 (.1), EARLY-PHYTOCHROME-RESPONSIVE1 (.2)
Gene model
Gene model cDNA support
AT1G18330.1 28
AT1G18330.2 19
Entry clone (w/o stop) RE_02G02
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(P) 46686: other biological processes ->response to cadmium ion
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other cellular processes ->regulation of transcription, DNA-templated
(P) 7623: other biological processes ->circadian rhythm
(P) 9651: response to abiotic or biotic stimulus ->response to salt stress
(P) 9723: other biological processes ->response to ethylene
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice
sorghum
physcomitrella
Total 2 2
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        taller(approx. 60cm) than wt(approx. 35cm), bigger rosette, elongated leaf

         tall height (direct input), 
         slow growth (direct input), 
         too large leaf (direct input)


        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         long hypocotyl 
         (A107014-14)
         

         long petiole, 
         late flowering, 
         too many rosettes 
         (A20434-130)
         

         
         
         

         narrow leaf, 
         loss of apical dominance 
         (A20434-139)
         

         
         

         long hypocotyl 
         (A107014-13)
         

         long hypocotyl 
         (A107014-11)
         

         long hypocotyl 
         (A107014-12)
         

         long petiole, 
         late flowering 
         (A20434-148)
         


        		
       

       

        Phenotype in ornamental plants


        
         

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