Alias |
|
TF Classification |
|
TAIR short description |
C2H2-like zinc finger protein (.1) |
TAIR annotation |
C2H2-like zinc finger protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT1G26610.1); Has 9932 Blast hits to 6385 proteins in 211 species: Archae - 0; Bacteria - 218; Metazoa - 8275; Fungi - 157; Plants - 592; Viruses - 3; Other Eukaryotes - 687 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
IE_06F06 |
External link |
|
Gene Ontology (GO) |
(F) 3676: nucleic acid binding |
->nucleic acid binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(C) 5634: nucleus |
->nucleus |
(P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
(F) 8270: other binding |
->zinc ion binding |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
|
|
|
|
|
soybean |
|
|
|
|
|
rice |
|
|
|
|
|
sorghum |
|
|
|
|
|
physcomitrella |
|
|
|
|
|
Total |
|
|
|
|
0E0 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> The work interrupted(07Feb) |
Plasmid construction | -> The work interrupted(07Feb) |
Transformed | -> not_yet |
T1 seed harvested | -> not_yet |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
Comment |
|