fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G27360 (SPL11)

Alias SPL11
TF Classification
FioreDBSBP (Click to show phylogenetic tree)
RARTFSBP
AtTFDBSBP
PlnTFDBSBP (v3.0), SBP (v1.0)
DATFSBP
TAIR short description squamosa promoter-like 11 (.1.2.3.4)
TAIR annotation In conjunction with SPL10 and SPL2, SPL11 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. (.1.2.3.4)
Gene model
Gene model cDNA support
AT1G27360.1 48
AT1G27360.3 27
AT1G27360.4 26
AT1G27360.2 24
Entry clone (w/o stop) RE_0962_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 46872: other binding ->metal ion binding
(P) 48510: other biological processes ->regulation of timing of transition from vegetative to reproductive phase
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Target sequence miRNA/tasiRNA sequence Map
5'--3'

miR156a: 3'-CACGAGTGAGAGAAGACAGT-5'
5'--3'

miR156b: 3'-CACGAGTGAGAGAAGACAGT-5'
5'--3'

miR156c: 3'-CACGAGTGAGAGAAGACAGT-5'
5'--3'

miR156d: 3'-CACGAGTGAGAGAAGACAGT-5'
5'--3'

miR156e: 3'-CACGAGTGAGAGAAGACAGT-5'
5'--3'

miR156f: 3'-CACGAGTGAGAGAAGACAGT-5'
5'--3'

miR156g: 3'-CACGAGTGAGAGAAGACAGC-5'
5'--3'

miR156h: 3'-CACGAGAGAAAGAAGACAGTT-5'
5'--3'

miR156i: 3'-CACGAGAGAGAGAAGACAGTT-5'
5'--3'

miR156j: 3'-CACGAGAGAGAGAAGACAGT-5'
5'--3'

miR157a: 3'-CACGAGAGATAGAAGACAGTT-5'
5'--3'

miR157b: 3'-CACGAGAGATAGAAGACAGTT-5'
5'--3'

miR157c: 3'-CACGAGAGATAGAAGACAGTT-5'
5'--3'

miR157d: 3'-CACGAGAGATAGAAGACAGT-5'
Orthologs
Type
Ia Ib II III Total
poplar
soybean
rice
sorghum
physcomitrella
Total 0E0
Repression motif 
ASAESDLCLKLGKRTY at 123/393 in AT1G27360.1
ASAESDLCLKLGKRTY at 123/393 in AT1G27360.2
ASAESDLCLKLGKRTY at 123/393 in AT1G27360.3
ASAESDLCLKLGKRTY at 123/393 in AT1G27360.4
Repression motif
in putative orthologs
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
View all photo 		shrank flower organs, reduced apical dominance, reduced number of stamen in early arising flowers
short pedicel (direct input), loss of apical dominance (direct input), abnormal flower (direct input), narrow leaf (direct input)
and more...
CRES-T phenotype from publication slow growth, loss of apical dominance (PMID19880401)
CRES-T phenotype from bulk project dwarf, short pedicel, abnormal leaf (A20162-66)
abnormal shaped leaf (A20257-93)

fragile stem (A20161-26)
long petiole, twisted petiole (A20258-151)

narrow leaf, late flowering, loss of apical dominance (A20257-69)

rough surface leaf (A20561-183)
narrow leaf (A20256-5)

narrow leaf, late flowering, loss of apical dominance (A20257-84)

too many rosettes (A20161-1)
Phenotype in ornamental plants
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