Alias |
SPL11 |
TF Classification |
FioreDB | SBP (Click to show phylogenetic tree) |
RARTF | SBP |
AtTFDB | SBP |
PlnTFDB | SBP (v3.0), SBP (v1.0) |
DATF | SBP |
|
TAIR short description |
squamosa promoter-like 11 (.1.2.3.4) |
TAIR annotation |
In conjunction with SPL10 and SPL2, SPL11 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. (.1.2.3.4) |
Gene model |
|
Entry clone (w/o stop) |
RE_0962_x |
External link |
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Gene Ontology (GO) |
(F) 3677: DNA or RNA binding |
->DNA binding |
(F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
(F) 46872: other binding |
->metal ion binding |
(P) 48510: other biological processes |
->regulation of timing of transition from vegetative to reproductive phase |
(C) 5634: nucleus |
->nucleus |
(P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
(P) 6355: transcription,DNA-dependent |
->regulation of transcription, DNA-templated |
|
miRNA/tasiRNA |
Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
miR156a: 3'-CACGAGTGAGAGAAGACAGT-5' |
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5'--3'
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miR156b: 3'-CACGAGTGAGAGAAGACAGT-5' |
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5'--3'
|
miR156c: 3'-CACGAGTGAGAGAAGACAGT-5' |
|
|
5'--3'
|
miR156d: 3'-CACGAGTGAGAGAAGACAGT-5' |
|
|
5'--3'
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miR156e: 3'-CACGAGTGAGAGAAGACAGT-5' |
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|
5'--3'
|
miR156f: 3'-CACGAGTGAGAGAAGACAGT-5' |
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|
5'--3'
|
miR156g: 3'-CACGAGTGAGAGAAGACAGC-5' |
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|
5'--3'
|
miR156h: 3'-CACGAGAGAAAGAAGACAGTT-5' |
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|
5'--3'
|
miR156i: 3'-CACGAGAGAGAGAAGACAGTT-5' |
|
|
5'--3'
|
miR156j: 3'-CACGAGAGAGAGAAGACAGT-5' |
|
|
5'--3'
|
miR157a: 3'-CACGAGAGATAGAAGACAGTT-5' |
|
|
5'--3'
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miR157b: 3'-CACGAGAGATAGAAGACAGTT-5' |
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|
5'--3'
|
miR157c: 3'-CACGAGAGATAGAAGACAGTT-5' |
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5'--3'
|
miR157d: 3'-CACGAGAGATAGAAGACAGT-5' |
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Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
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soybean |
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rice |
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sorghum |
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physcomitrella |
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Total |
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|
0E0 |
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Repression motif |
ASAESDLCLKLGKRTY at 123/393 in AT1G27360.1 ASAESDLCLKLGKRTY at 123/393 in AT1G27360.2 ASAESDLCLKLGKRTY at 123/393 in AT1G27360.3 ASAESDLCLKLGKRTY at 123/393 in AT1G27360.4
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> done |
Plasmid construction | -> done |
Transformed | -> done |
T1 seed harvested | -> done |
T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
View all photo |
shrank flower organs, reduced apical dominance, reduced number of stamen in early arising flowers
loss of apical dominance (direct input),
short pedicel (direct input),
narrow leaf (direct input),
abnormal flower (direct input)
and more... |
CRES-T phenotype from publication |
slow growth, loss of apical dominance (PMID19880401)
|
CRES-T phenotype from bulk project |
dwarf,
short pedicel,
abnormal leaf
(A20162-66)
long petiole,
twisted petiole
(A20258-151)
rough surface leaf
(A20561-183)
abnormal shaped leaf
(A20257-93)
narrow leaf,
late flowering,
loss of apical dominance
(A20257-69)
fragile stem
(A20161-26)
narrow leaf
(A20256-5)
too many rosettes
(A20161-1)
narrow leaf,
late flowering,
loss of apical dominance
(A20257-84)
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Phenotype in ornamental plants
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Comment |
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