fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G68320 (BW62C, BW62B, AtMYB62)

Alias BW62C, BW62B, AtMYB62
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / ATR1
AtTFDBMYB / R2R3-MYBs
PlnTFDBMYB (v3.0), MYB (v1.0)
DATFMYB
TAIR short description myb domain protein 62 (.1)
TAIR annotation putative transcription factor: R2R3-MYB transcription family. Involved in regulation of phosphate starvation responses and gibberellic acid biosynthesis. (.1)
Gene model
Gene model cDNA support
AT1G68320.1 3
Entry clone (w/o stop) RE_03F03_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10015: developmental processes ->root morphogenesis
(P) 10373: other cellular processes ->negative regulation of gibberellin biosynthetic process
(F) 1135: other molecular functions ->transcription factor activity, RNA polymerase II transcription factor recruiting
(P) 16036: response to stress ->cellular response to phosphate starvation
(P) 30154: other cellular processes ->cell differentiation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 44212: nucleic acid binding ->transcription regulatory region DNA binding
(P) 45892: other cellular processes ->negative regulation of transcription, DNA-templated
(P) 55062: other biological processes ->phosphate ion homeostasis
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 6357: other metabolic processes ->regulation of transcription from RNA polymerase II promoter
(P) 9686: other metabolic processes ->gibberellin biosynthetic process
(P) 9740: other cellular processes ->gibberellic acid mediated signaling pathway
(P) 9751: other biological processes ->response to salicylic acid
(F) 981: transcription factor activity ->RNA polymerase II transcription factor activity, sequence-specific DNA binding
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 2 5 8
soybean 2 4 6
rice 1 4 5
sorghum 1 4 5
physcomitrella
Total 3 4 17 24
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
SCEDEMDLRRGPWTVDE at 19/322 in soybean Gm045910 (Type III)
LFPQGLDLQSMDPNTPWN at 282/322 in soybean Gm045910 (Type III)
QSEDEMDLRRGPWTVDE at 24/340 in soybean Gm023935 (Type III)
SSEDEMDLRRGPWTVDE at 19/325 in soybean Gm019269 (Type III)
QSEDEMDLRRGPWTVDE at 23/341 in soybean Gm042133 (Type III)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project
        
        

        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        

        
       

       

        Phenotype in ornamental plants


        
         

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