fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G36960 (TKI1)

Alias TKI1
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / CIRCADIAN CLOCK ASSOCIATED 1
AtTFDB
PlnTFDBMYB-related (v3.0), MYB-related (v1.0)
DATFMYB-related
TAIR short description TSL-kinase interacting protein 1 (.1.2.3)
TAIR annotation Arabidopsis thaliana myb/SANT domain protein (.1.2.3)
Gene model
Gene model cDNA support
AT2G36960.1 34
AT2G36960.2 30
AT2G36960.3 28
Entry clone (w/o stop) IE_0068
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 16301: kinase activity ->kinase activity
(P) 16310: other metabolic processes ->phosphorylation
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3682: other binding ->chromatin binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6351: transcription,DNA-dependent ->transcription, DNA-templated
(P) 6355: other metabolic processes ->regulation of transcription, DNA-templated
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 2 3
soybean 2 1 3
rice
sorghum 1 1
physcomitrella
Total 1 3 3 7
Repression motif 
MQFSAKLKLQLFPIDE at 318/743 in AT2G36960.1
DKHNPHLELTLSNRKK at 342/743 in AT2G36960.1
MQFSAKLKLQLFPIDE at 316/741 in AT2G36960.2
DKHNPHLELTLSNRKK at 340/741 in AT2G36960.2
MQFSAKLKLQLFPIDE at 319/744 in AT2G36960.3
DKHNPHLELTLSNRKK at 343/744 in AT2G36960.3
Repression motif
in putative orthologs		 
AHNNMKLKLQLFPIDD at 310/781 in poplar Pt005248 (Type III)
DKHNPHLELTLSTRKK at 334/781 in poplar Pt005248 (Type III)
VNNIMKLKLQLFPIDE at 279/769 in soybean Gm044588 (Type III)
DKHNPHLELTLSTRKK at 303/769 in soybean Gm044588 (Type III)
VNNIMKLKLQLFPIDE at 355/833 in soybean Gm003066 (Type II)
DKHNPHLELTLSTRKK at 379/833 in soybean Gm003066 (Type II)
ALTNMKLKLQLFPIDD at 311/753 in poplar Pt044390 (Type II)
DKHNPHLELTLSTRKK at 335/753 in poplar Pt044390 (Type II)
VNNIMKLKLQLFPIDE at 309/783 in soybean Gm044587 (Type II)
DKHNPHLELTLSTRKK at 333/783 in soybean Gm044587 (Type II)
SQAPVKLKLQLFPINE at 315/663 in sorghum Sb002311 (Type Ib)
DDHNPHLELTLSSRKK at 339/663 in sorghum Sb002311 (Type Ib)
ALTNMKLKLQLFPIDD at 311/784 in poplar Pt044389 (Type III)
DKHNPHLELTLSTRKK at 335/784 in poplar Pt044389 (Type III)
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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