Alias |
|
TF Classification |
FioreDB | C2H2ZnF (Click to show phylogenetic tree) |
RARTF | |
AtTFDB | C2H2 |
PlnTFDB | C2H2 (v3.0), C2H2 (v1.0) |
DATF | C2H2 |
|
TAIR short description |
zinc finger (C2H2 type, AN1-like) family protein (.1) |
TAIR annotation |
zinc finger (C2H2 type, AN1-like) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, AN1-type (InterPro:IPR000058), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type, AN1-like) family protein (TAIR:AT3G57480.1); Has 760 Blast hits to 744 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 485; Fungi - 122; Plants - 83; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). (.1) |
Gene model |
|
Entry clone (w/o stop) |
IE_06F01 |
External link |
|
Gene Ontology (GO) |
(F) 3676: nucleic acid binding |
->nucleic acid binding |
(C) 5634: nucleus |
->nucleus |
(F) 8270: other binding |
->zinc ion binding |
|
miRNA/tasiRNA |
|
Orthologs |
|
Type |
Ia |
Ib |
II |
III |
Total |
poplar |
1 |
|
1 |
|
2 |
soybean |
1 |
|
4 |
|
5 |
rice |
|
|
|
|
|
sorghum |
1 |
|
|
|
1 |
physcomitrella |
1 |
|
|
|
1 |
Total |
4 |
|
5 |
|
9 |
|
Repression motif |
|
Repression motif in putative orthologs |
|
Status |
Plasmid construction | -> not_yet |
Plasmid construction | -> not_yet |
Transformed | -> not_yet |
T1 seed harvested | -> not_yet |
T2 seed harvested | -> not_yet |
|
CRES-T phenotype from individual project
|
|
CRES-T phenotype from publication |
|
CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
Comment |
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