fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
>>AT2G42410 (ATZFP11, ZFP11)
Alias
ATZFP11, ZFP11
TF Classification
FioreDB
C2H2ZnF
(Click to show phylogenetic tree)
RARTF
C2H2(Zn)
/ InterPro C2H2
AtTFDB
C2H2
PlnTFDB
C2H2
(v3.0), C2H2 (v1.0)
DATF
C2H2
TAIR short description
zinc finger protein 11 (.1)
TAIR annotation
Encodes a zinc finger protein ZFP11. Overexpression of ZFP11 causes mortality and a deformed phenotype. (.1)
Gene model
Gene model
cDNA support
AT2G42410.1
0
Entry clone (w/o stop)
RE_01F04
External link
General info
TAIR DATA
Genomic seq
TAIR seq viewer
SNP
SALK SNP Viewer
T-DNA tag line
T-DNA Express
miRNA
Search ASRP
Phylogeny
SALAD database
Promoter
ppdb
Microarray data
FioreDB
ATTED-II
ATTED-II data
NCBI GEO
NCBI GEO profile
NASC
NASCarray_SpotHistory
NASCarray_DigitalNorthern
Genevestigator
Genevestigator
eFP Browser
Developmental Map
Abiotic Stress
AtGenExpress
Development
Hormone
Abiotic Stress
Light
Pathogen
Gene Ontology (GO)
(F) 3676: nucleic acid binding
->nucleic acid binding
(F) 3700: transcription factor activity
->transcription factor activity, sequence-specific DNA binding
(P) 40008: other biological processes
->regulation of growth
(F) 46872: other binding
->metal ion binding
(C) 5634: nucleus
->nucleus
(P) 6351: transcription,DNA-dependent
->transcription, DNA-templated
(P) 6355: other cellular processes
->regulation of transcription, DNA-templated
(P) 7275: developmental processes
->multicellular organism development
(F) 8270: other binding
->zinc ion binding
miRNA/tasiRNA
Orthologs
Type
Ia
Ib
II
III
Total
poplar
1
1
soybean
rice
sorghum
physcomitrella
Total
1
1
Repression motif
PNQVL
DLELRL
GYL at 205/214 in AT2G42410.1
Repression motif
in putative orthologs
PKEVL
DLELRL
GLLV at 187/196 in poplar
Pt000211
(Type Ib)
Status
Plasmid construction
-> done
Plasmid construction
-> done
Transformed
-> done
T1 seed harvested
-> done
T2 seed harvested
-> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
Comment