| Alias |
HAT3.1 |
| TF Classification |
|
| TAIR short description |
Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain (.1) |
| TAIR annotation |
Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains. (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
IE_05B10 |
| External link |
|
| Gene Ontology (GO) |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (F) 43565: DNA or RNA binding |
->sequence-specific DNA binding |
| (P) 45893: transcription,DNA-dependent |
->positive regulation of transcription, DNA-templated |
| (F) 46872: other binding |
->metal ion binding |
| (F) 5515: protein binding |
->protein binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
| (P) 6355: other metabolic processes |
->regulation of transcription, DNA-templated |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
1 |
|
|
1 |
| soybean |
|
1 |
|
|
1 |
| rice |
|
1 |
|
|
1 |
| sorghum |
|
1 |
|
|
1 |
| physcomitrella |
|
|
|
|
|
| Total |
|
4 |
|
|
4 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> done |
|
| CRES-T phenotype from individual project
|
no visible phenotype (direct input)
|
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
| Comment |
|
