fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT5G17300 (RVE1)

Alias RVE1
TF Classification
FioreDBMYB (Click to show phylogenetic tree)
RARTFMYB superfamily / CIRCADIAN CLOCK ASSOCIATED 1
AtTFDB
PlnTFDBMYB-related (v3.0), MYB-related (v1.0)
DATFMYB-related
TAIR short description REVEILLE 1, Homeodomain-like superfamily protein (.1)
TAIR annotation Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner. (.1)
Gene model
Gene model cDNA support
AT5G17300.1 39
Entry clone (w/o stop) RE_1447_x
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10600: other metabolic processes ->regulation of auxin biosynthetic process
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(C) 5634: nucleus ->nucleus
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 7623: other biological processes ->circadian rhythm
(P) 9734: signal transduction ->auxin-activated signaling pathway
(P) 9851: other cellular processes ->auxin biosynthetic process
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice 1 1
sorghum
physcomitrella 1 1
Total 4 4
Repression motif
PEELETLKLELFPSER at 205/387 in AT5G17300.1
Repression motif
in putative orthologs
        
Status
Plasmid construction -> done
Plasmid construction -> done
Transformed -> done
T1 seed harvested -> done
T2 seed harvested -> done
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants

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