| Alias |
|
| TF Classification |
| FioreDB | CCAAT (Click to show phylogenetic tree) |
| RARTF | CCAAT / HAP5 type |
| AtTFDB | |
| PlnTFDB | CCAAT (v3.0), CCAAT (v1.0) |
| DATF | |
|
| TAIR short description |
Histone superfamily protein (.1) |
| TAIR annotation |
Histone superfamily protein; FUNCTIONS IN: sequence-specific DNA binding, DNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Transcription factor CBF/NF-Y/archaeal histone (InterPro:IPR003958), Histone-fold (InterPro:IPR009072); BEST Arabidopsis thaliana protein match is: nuclear factor Y, subunit C11 (TAIR:AT3G12480.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
|
| External link |
|
| Gene Ontology (GO) |
| (C) 5634: nucleus |
->nucleus |
|
| miRNA/tasiRNA |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
|
1 |
|
1 |
| soybean |
|
|
|
|
|
| rice |
|
|
|
|
|
| sorghum |
|
|
|
|
|
| physcomitrella |
1 |
|
|
|
1 |
| Total |
1 |
|
1 |
|
2 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> not_yet |
| Plasmid construction | -> not_yet |
| Transformed | -> not_yet |
| T1 seed harvested | -> not_yet |
| T2 seed harvested | -> not_yet |
|
| CRES-T phenotype from individual project
|
|
| CRES-T phenotype from publication |
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
|
| Comment |
|
