| Alias |
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| TF Classification |
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| TAIR short description |
C2H2 and C2HC zinc fingers superfamily protein (.1) |
| TAIR annotation |
C2H2 and C2HC zinc fingers superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: stem, sepal, carpel, stamen; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, double-stranded RNA binding (InterPro:IPR022755); BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT3G45260.1); Has 38003 Blast hits to 17147 proteins in 232 species: Archae - 0; Bacteria - 0; Metazoa - 35900; Fungi - 231; Plants - 711; Viruses - 1; Other Eukaryotes - 1160 (source: NCBI BLink). (.1) |
| Gene model |
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| Entry clone (w/o stop) |
IE_07B11 |
| External link |
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| Gene Ontology (GO) |
| (F) 3676: nucleic acid binding |
->nucleic acid binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
| (F) 8270: other binding |
->zinc ion binding |
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| miRNA/tasiRNA |
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| Orthologs |
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Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
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| soybean |
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| rice |
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| sorghum |
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| physcomitrella |
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| Total |
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0E0 |
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| Repression motif |
SPLILTLTLSLQPPLK at 20/450 in AT5G60470.1
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> not_yet |
| Plasmid construction | -> not_yet |
| Transformed | -> not_yet |
| T1 seed harvested | -> not_yet |
| T2 seed harvested | -> not_yet |
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| CRES-T phenotype from individual project
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| CRES-T phenotype from publication |
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| CRES-T phenotype from bulk project |
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Phenotype in ornamental plants
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| Comment |
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