| Alias |
TCP5 |
| TF Classification |
| FioreDB | TCP (Click to show phylogenetic tree) |
| RARTF | TCP |
| AtTFDB | TCP |
| PlnTFDB | TCP (v3.0), TCP (v1.0) |
| DATF | TCP |
|
| TAIR short description |
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 (.1) |
| TAIR annotation |
TCP gene involved in heterochronic control of leaf differentiation. (.1) |
| Gene model |
|
| Entry clone (w/o stop) |
RE_1009_x |
| External link |
|
| Gene Ontology (GO) |
| (P) 30154: other cellular processes |
->cell differentiation |
| (F) 3677: DNA or RNA binding |
->DNA binding |
| (F) 3700: transcription factor activity |
->transcription factor activity, sequence-specific DNA binding |
| (P) 45962: other biological processes |
->positive regulation of development, heterochronic |
| (P) 48366: developmental processes |
->leaf development |
| (F) 5515: protein binding |
->protein binding |
| (C) 5634: nucleus |
->nucleus |
| (P) 6351: transcription,DNA-dependent |
->transcription, DNA-templated |
| (P) 6355: other cellular processes |
->regulation of transcription, DNA-templated |
| (P) 9965: developmental processes |
->leaf morphogenesis |
|
| miRNA/tasiRNA |
| Target sequence |
miRNA/tasiRNA sequence |
Map |
5'--3'
|
| miRN4412: 3'-TTGGTAGTAGTAGTAGTAGT-5' |
|
 |
|
| Orthologs |
|
Type |
| Ia |
Ib |
II |
III |
Total |
| poplar |
|
1 |
|
|
1 |
| soybean |
|
1 |
|
|
1 |
| rice |
|
1 |
|
|
1 |
| sorghum |
|
1 |
|
|
1 |
| physcomitrella |
|
|
|
|
|
| Total |
|
4 |
|
|
4 |
|
| Repression motif |
|
Repression motif
in putative orthologs |
|
| Status |
| Plasmid construction | -> done |
| Plasmid construction | -> done |
| Transformed | -> done |
| T1 seed harvested | -> done |
| T2 seed harvested | -> done |
|
CRES-T phenotype from individual project
View all photo |
cotyledon, leaf, sepal, petal, stamen, silique,similar to CR111
abnormal shaped silique (direct input),
serrated leaf (direct input),
abnormal sepal (direct input),
short silique (direct input),
abnormal stamen (direct input),
adventitious shoot formation (direct input),
abnormal seedling (direct input),
abnormal petal (direct input)
  |
| CRES-T phenotype from publication |
abnormal seedling, rough surface leaf, serrated leaf, abnormal shaped leaf, abnormal leaf, aberrant margin, abnormal sepal, abnormal petal, abnormal shaped silique, sterile or low fertility (PMID17307931)
|
| CRES-T phenotype from bulk project |
|
Phenotype in ornamental plants
|
| ID |
Species |
Construct |
Date |
Comment |
Phenotype |
Photo |
| ID42 |
Chrysanthemum |
35S:AtCDS-SRDX |
2005-08-18 |
|
incurving leaves, dark green leaves, defect of ray floret, disk floret and involucre |
  and more... |
| ID49 |
Gentiana |
AtACT2pro:AtCDS-SRDX |
2005-08-31 |
|
Abnormal leaf
One out of 41 lines showed abnormal phenotype. This line can be propagated in vitro only. |
 |
| ID155 |
Pharbitis |
35S:AtCDS-SRDX |
2006-10-18 |
|
wrinkled petal and flower bud, wavy leaf |
  and more... |
| ID51 |
Cyclamen |
35S:AtCDS-SRDX |
2005-09-08 |
|
serrated hyponastic leaves, small petal |
|
|
| Comment |
|
