fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT1G70510 (ATK1, KNAT2)

Alias ATK1, KNAT2
TF Classification
FioreDBHD (Click to show phylogenetic tree)
RARTFHB / SHOOTMERISTEMLESS
AtTFDBHomeobox / KNOX I
PlnTFDBHB (v3.0), HB (v1.0)
DATFHB
TAIR short description ARABIDOPSIS THALIANA KN 1, KNOTTED-like from Arabidopsis thaliana 2 (.1)
TAIR annotation A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems. (.1)
Gene model
Gene model cDNA support
AT1G70510.1 5
Entry clone (w/o stop) RE_01G10
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(P) 10094: developmental processes ->specification of carpel identity
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 43565: DNA or RNA binding ->sequence-specific DNA binding
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 6355: transcription,DNA-dependent ->regulation of transcription, DNA-templated
(P) 9723: other biological processes ->response to ethylene
(P) 9736: signal transduction ->cytokinin-activated signaling pathway
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 2 3
rice
sorghum
physcomitrella 1 1
Total 1 2 2 5
Repression motif 

       

       

        Repression motif
in putative orthologs		
        
SVSGQSLSLSLFPGKD at 183/341 in poplar Pt042564 (Type II)

        

       

       

        Status
        
         

          
Plasmid construction -> done

          
Plasmid construction -> done

          
Transformed -> done

          
T1 seed harvested -> done

          
T2 seed harvested -> done

         

        		
       

       

        CRES-T phenotype from individual project

View all photo        		
        

         abnormal shaped leaf (direct input), 
         sterile or low fertility (A20549), 
         narrow leaf (A20549), 
         abnormal flowering or growth (direct input), 
         abnormal petal (A20549)


        		
       

       

        CRES-T phenotype from publication
        

        
       


       

        CRES-T phenotype from bulk project
        
         fused stem, 
         sterile or low fertility 
         (A20752-118)
         

         dwarf, 
         bushy, 
         abnormal flower 
         (A20687-173)
         


        		
       

       

        Phenotype in ornamental plants


        
         

          

           ID
           Species
           Construct
           Date
           Comment
           Phenotype
           Photo
          

          

           ID50072
           Torenia
           35S:AtCDS-SRDX
           2008-10-01
           development bulk, 1 line 
           no phenotype 
            
          

         

         

          Comment