fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

>>AT2G14760 (bHLH084)

Alias bHLH084
TF Classification
FioreDBbHLH (Click to show phylogenetic tree)
RARTFbHLH / checked group
AtTFDBbHLH
PlnTFDBbHLH (v3.0), bHLH (v1.0)
DATFbHLH
TAIR short description basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.2), basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.3)
TAIR annotation basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: ROOT HAIR DEFECTIVE 6-LIKE 2 (TAIR:AT4G33880.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). (.1)
Gene model
Gene model cDNA support
AT2G14760.1 10
AT2G14760.2 4
AT2G14760.3 1
Entry clone (w/o stop) IE_06F11
External link
General info TAIR DATA
Genomic seq TAIR seq viewer
SNP SALK SNP Viewer
T-DNA tag line T-DNA Express
miRNA Search ASRP
Phylogeny SALAD database
Promoter ppdb
Microarray data
FioreDB
ATTED-II ATTED-II data
NCBI GEO NCBI GEO profile
NASC NASCarray_SpotHistory NASCarray_DigitalNorthern
Genevestigator Genevestigator
eFP Browser Developmental Map Abiotic Stress
AtGenExpress Development Hormone Abiotic Stress Light Pathogen
Gene Ontology (GO)
(F) 3677: DNA or RNA binding ->DNA binding
(F) 3700: transcription factor activity ->transcription factor activity, sequence-specific DNA binding
(F) 46983: protein binding ->protein dimerization activity
(F) 5515: protein binding ->protein binding
(C) 5634: nucleus ->nucleus
(P) 9555: developmental processes ->pollen development
miRNA/tasiRNA
Orthologs
Type
Ia Ib II III Total
poplar 1 1
soybean 1 1
rice
sorghum
physcomitrella
Total 2 2
Repression motif 
NGMDIGLDLKLNALTR at 317/328 in AT2G14760.1
NGMDIGLDLKLNALTR at 330/341 in AT2G14760.3
Repression motif
in putative orthologs
Status
Plasmid construction -> not_yet
Plasmid construction -> not_yet
Transformed -> not_yet
T1 seed harvested -> not_yet
T2 seed harvested -> not_yet
CRES-T phenotype from individual project
CRES-T phenotype from publication
CRES-T phenotype from bulk project
Phenotype in ornamental plants
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